RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 NEK4P51957 841 aa24.66■■□□□ 1.54
RARA-201ENST00000254066 GNAI1P63096 354 aa24.66■■□□□ 1.54
RARA-201ENST00000254066 THEMISQ8N1K5 641 aaPredicted RBP24.66■■□□□ 1.54
RARA-201ENST00000254066 ATAD2Q6PL18 1390 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 IFT57Q9NWB7 429 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 FAM135BQ49AJ0 1406 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 RTL1A6NKG5 1358 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 SPDYE4A6NLX3 237 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 GOLGA6L6A8MZA4 724 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 TMEM51Q9NW97 253 aa24.65■■□□□ 1.54
RARA-201ENST00000254066 U2AF2P26368 475 aaKnown RBP eCLIP24.64■■□□□ 1.54
RARA-201ENST00000254066 USP48Q86UV5 1035 aa24.64■■□□□ 1.53
RARA-201ENST00000254066 OSBPL3Q9H4L5 887 aa24.63■■□□□ 1.53
RARA-201ENST00000254066 ZFYVE9O95405 1425 aa24.63■■□□□ 1.53
RARA-201ENST00000254066 MCCP23508 829 aa24.63■■□□□ 1.53
RARA-201ENST00000254066 LMTK2Q8IWU2 1503 aa24.63■■□□□ 1.53
RARA-201ENST00000254066 LRRC7Q96NW7 1537 aa24.62■■□□□ 1.53
RARA-201ENST00000254066 RPGRIP1LQ68CZ1 1315 aa24.62■■□□□ 1.53
RARA-201ENST00000254066 FOXD4L5Q5VV16 416 aaPredicted RBP24.62■■□□□ 1.53
RARA-201ENST00000254066 C16orf71Q8IYS4 520 aaPredicted RBP24.62■■□□□ 1.53
RARA-201ENST00000254066 FOXD4L4Q8WXT5 416 aaPredicted RBP24.62■■□□□ 1.53
RARA-201ENST00000254066 ATP10DQ9P241 1426 aa24.61■■□□□ 1.53
RARA-201ENST00000254066 LTBP4Q8N2S1 1624 aa24.61■■□□□ 1.53
RARA-201ENST00000254066 ZNF853P0CG23 659 aa24.61■■□□□ 1.53
RARA-201ENST00000254066 ZNF771Q7L3S4 317 aaPredicted RBP24.61■■□□□ 1.53
RARA-201ENST00000254066 C17orf53Q8N3J3 647 aaPredicted RBP24.61■■□□□ 1.53
RARA-201ENST00000254066 GADD45BO75293 160 aaPredicted RBP24.6■■□□□ 1.53
RARA-201ENST00000254066 ARHGEF28Q8N1W1 1705 aaKnown RBP24.6■■□□□ 1.53
RARA-201ENST00000254066 A0A1W2PP64 1363 aa24.6■■□□□ 1.53
RARA-201ENST00000254066 CGNQ9P2M7 1197 aaKnown RBP24.6■■□□□ 1.53
RARA-201ENST00000254066 RGS12O14924 1447 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 FAM193AP78312 1265 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 SSH2Q76I76 1423 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 FAM177BA6PVY3 158 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 VGFO15240 615 aaPredicted RBP24.59■■□□□ 1.53
RARA-201ENST00000254066 UBE2HP62256 183 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 NFE2L2Q16236 605 aa24.59■■□□□ 1.53
RARA-201ENST00000254066 EPB41L2O43491 1005 aaKnown RBP24.58■■□□□ 1.53
RARA-201ENST00000254066 HCLS1P14317 486 aaPredicted RBP24.58■■□□□ 1.53
RARA-201ENST00000254066 SECISBP2LQ93073 1101 aaKnown RBP24.58■■□□□ 1.53
RARA-201ENST00000254066 CTNNA3Q9UI47 895 aa24.58■■□□□ 1.53
RARA-201ENST00000254066 ZBTB7CA1YPR0 619 aa24.57■■□□□ 1.52
RARA-201ENST00000254066 FUCA2Q9BTY2 467 aa24.57■■□□□ 1.52
RARA-201ENST00000254066 RPAP1Q9BWH6 1393 aaPredicted RBP24.57■■□□□ 1.52
RARA-201ENST00000254066 TWISTNBQ3B726 338 aaPredicted RBP24.57■■□□□ 1.52
RARA-201ENST00000254066 TSPYL6Q8N831 410 aa24.57■■□□□ 1.52
RARA-201ENST00000254066 CCDC66A2RUB6 948 aa24.56■■□□□ 1.52
RARA-201ENST00000254066 KCNF1Q9H3M0 494 aa24.56■■□□□ 1.52
RARA-201ENST00000254066 DDX41Q9UJV9 622 aaKnown RBP24.56■■□□□ 1.52
RARA-201ENST00000254066 NCBP1Q09161 790 aaKnown RBP24.56■■□□□ 1.52
RARA-201ENST00000254066 MORC2Q9Y6X9 1032 aaPredicted RBP24.56■■□□□ 1.52
RARA-201ENST00000254066 SMTNL1A8MU46 457 aa24.55■■□□□ 1.52
RARA-201ENST00000254066 CEP85Q6P2H3 762 aa24.55■■□□□ 1.52
RARA-201ENST00000254066 OTUD7AQ8TE49 926 aaPredicted RBP24.55■■□□□ 1.52
RARA-201ENST00000254066 PYCARDQ9ULZ3 195 aa24.55■■□□□ 1.52
RARA-201ENST00000254066 MPNDQ8N594 471 aa24.54■■□□□ 1.52
RARA-201ENST00000254066 GGNBP2Q9H3C7 697 aa24.54■■□□□ 1.52
RARA-201ENST00000254066 FYB1O15117 783 aa24.53■■□□□ 1.52
RARA-201ENST00000254066 CREBRFQ8IUR6 639 aa24.53■■□□□ 1.52
RARA-201ENST00000254066 SLFN14P0C7P3 912 aa24.53■■□□□ 1.52
RARA-201ENST00000254066 HAP1P54257 671 aaPredicted RBP24.53■■□□□ 1.52
RARA-201ENST00000254066 PAXBP1Q9Y5B6 917 aa24.53■■□□□ 1.52
RARA-201ENST00000254066 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 SLC20A2Q08357 652 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 MBIPQ9NS73 344 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 TERF2IPQ9NYB0 399 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 LMOD3Q0VAK6 560 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 ESYT1Q9BSJ8 1104 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 ATP6V1DQ9Y5K8 247 aa24.52■■□□□ 1.52
RARA-201ENST00000254066 GDPD2Q9HCC8 539 aa24.51■■□□□ 1.51
RARA-201ENST00000254066 SMARCA5O60264 1052 aaPredicted RBP24.5■■□□□ 1.51
RARA-201ENST00000254066 CNKSR2Q8WXI2 1034 aa24.5■■□□□ 1.51
RARA-201ENST00000254066 CPSF1Q10570 1443 aaKnown RBP24.5■■□□□ 1.51
RARA-201ENST00000254066 SRCIN1Q9C0H9 1055 aa24.5■■□□□ 1.51
RARA-201ENST00000254066 TMEM132EQ6IEE7 984 aa24.49■■□□□ 1.51
RARA-201ENST00000254066 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
RARA-201ENST00000254066 ZNF335Q9H4Z2 1342 aaPredicted RBP24.49■■□□□ 1.51
RARA-201ENST00000254066 HMMRO75330 724 aa24.49■■□□□ 1.51
RARA-201ENST00000254066 PDE1AP54750 535 aa24.49■■□□□ 1.51
RARA-201ENST00000254066 CABP2Q9NPB3 220 aa24.49■■□□□ 1.51
RARA-201ENST00000254066 NPHP4O75161 1426 aaPredicted RBP24.48■■□□□ 1.51
RARA-201ENST00000254066 CFAP65Q6ZU64 1925 aaKnown RBP24.48■■□□□ 1.51
RARA-201ENST00000254066 ZSCAN22P10073 491 aaPredicted RBP24.47■■□□□ 1.51
RARA-201ENST00000254066 TERF2Q15554 542 aa24.46■■□□□ 1.51
RARA-201ENST00000254066 TUBGCP6Q96RT7 1819 aa24.46■■□□□ 1.51
RARA-201ENST00000254066 CPS1P31327 1500 aa24.45■■□□□ 1.5
RARA-201ENST00000254066 AP5Z1O43299 807 aa24.45■■□□□ 1.5
RARA-201ENST00000254066 CCDC192P0DO97 292 aa24.45■■□□□ 1.5
RARA-201ENST00000254066 KRT222Q8N1A0 295 aa24.45■■□□□ 1.5
RARA-201ENST00000254066 SLIT1O75093 1534 aa24.45■■□□□ 1.5
RARA-201ENST00000254066 IGSF3O75054 1194 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 CDK11BP21127 795 aaKnown RBP24.44■■□□□ 1.5
RARA-201ENST00000254066 C8orf58Q8NAV2 365 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 KIF18AQ8NI77 898 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 CNPY2Q9Y2B0 182 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 KIF20BQ96Q89 1820 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 ARHGAP23Q9P227 1491 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 TCHHQ07283 1943 aa24.44■■□□□ 1.5
RARA-201ENST00000254066 CD163L1Q9NR16 1453 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms