RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ZNF652Q9Y2D9 606 aa15.39■□□□□ 0.05
NEK9-201ENST00000238616 CBX1P83916 185 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 BLOC1S2Q6QNY1 142 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 UPF3BQ9BZI7 483 aaKnown RBP15.38■□□□□ 0.05
NEK9-201ENST00000238616 LRSAM1Q6UWE0 723 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 PRKRIP1Q9H875 184 aaPredicted RBP15.38■□□□□ 0.05
NEK9-201ENST00000238616 TSR2Q969E8 191 aaKnown RBP15.38■□□□□ 0.05
NEK9-201ENST00000238616 CRACR2AQ9BSW2 395 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 CCDC88BA6NC98 1476 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 LUZP1Q86V48 1076 aa15.38■□□□□ 0.05
NEK9-201ENST00000238616 IMMTQ16891 758 aaKnown RBP15.37■□□□□ 0.05
NEK9-201ENST00000238616 APBB1IPQ7Z5R6 666 aaPredicted RBP15.37■□□□□ 0.05
NEK9-201ENST00000238616 PRAM1Q96QH2 718 aa15.37■□□□□ 0.05
NEK9-201ENST00000238616 STARD3NLO95772 234 aa15.37■□□□□ 0.05
NEK9-201ENST00000238616 SYCP3Q8IZU3 236 aa15.37■□□□□ 0.05
NEK9-201ENST00000238616 FERP16591 822 aa15.37■□□□□ 0.05
NEK9-201ENST00000238616 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
NEK9-201ENST00000238616 RANBP6O60518 1105 aaKnown RBP15.37■□□□□ 0.05
NEK9-201ENST00000238616 OTUD6BQ8N6M0 293 aa15.36■□□□□ 0.05
NEK9-201ENST00000238616 PDRG1Q9NUG6 133 aa15.36■□□□□ 0.05
NEK9-201ENST00000238616 C16orf71Q8IYS4 520 aaPredicted RBP15.36■□□□□ 0.05
NEK9-201ENST00000238616 ZNF444Q8N0Y2 327 aaPredicted RBP15.36■□□□□ 0.05
NEK9-201ENST00000238616 TERF1P54274 439 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 VPS36Q86VN1 386 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 SYNCQ9H7C4 482 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 PRKCSHP14314 528 aaPredicted RBP15.35■□□□□ 0.05
NEK9-201ENST00000238616 FKBP15Q5T1M5 1219 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 NUP88Q99567 741 aaPredicted RBP15.35■□□□□ 0.05
NEK9-201ENST00000238616 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 UQCRHLA0A096LP55 91 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 UQCRHP07919 91 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 CCDC144CPQ8IYA2 1237 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 BICD1Q96G01 975 aa15.35■□□□□ 0.05
NEK9-201ENST00000238616 RRS1Q15050 365 aaKnown RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 CKAP2LQ8IYA6 745 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 RRBP1Q9P2E9 1410 aaKnown RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 GCOM1H8Y6P7 765 aaPredicted RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 MYZAPP0CAP1 466 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 CCT4P50991 539 aaKnown RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 ZC3H6P61129 1189 aaKnown RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 WASF1Q92558 559 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 PTPRGP23470 1445 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 MIS18AQ9NYP9 233 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
NEK9-201ENST00000238616 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 DPH6Q7L8W6 267 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 TSNARE1Q96NA8 513 aa15.34■□□□□ 0.05
NEK9-201ENST00000238616 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.04
NEK9-201ENST00000238616 SPECC1Q5M775 1068 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 NAPBQ9H115 298 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 PPP1R14CQ8TAE6 165 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 PLS1Q14651 629 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 RNF187Q5TA31 235 aaPredicted RBP15.33■□□□□ 0.04
NEK9-201ENST00000238616 CTNNA3Q9UI47 895 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 TCERG1LQ5VWI1 586 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 IL1RAPL2Q9NP60 686 aa15.33■□□□□ 0.04
NEK9-201ENST00000238616 WWC3Q9ULE0 1092 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 HLTFQ14527 1009 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■□□□□ 10.9
NEK9-201ENST00000238616 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 NLRP5P59047 1200 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 TIGD1Q96MW7 591 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 NOP2P46087 812 aaKnown RBP15.32■□□□□ 0.04
NEK9-201ENST00000238616 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
NEK9-201ENST00000238616 PAIP2Q9BPZ3 127 aaKnown RBP15.32■□□□□ 0.04
NEK9-201ENST00000238616 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
NEK9-201ENST00000238616 SH3BP5O60239 455 aa15.31■□□□□ 0.04
NEK9-201ENST00000238616 RAB3IL1Q8TBN0 382 aa15.31■□□□□ 0.04
NEK9-201ENST00000238616 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
NEK9-201ENST00000238616 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
NEK9-201ENST00000238616 SPATA24Q86W54 205 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 TMOD3Q9NYL9 352 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 FERMT1Q9BQL6 677 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 GON4LQ3T8J9 2241 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 C6orf229H3BNL8 230 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 KIF5CO60282 957 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
NEK9-201ENST00000238616 SRRTQ9BXP5 876 aaKnown RBP15.3■□□□□ 0.04
NEK9-201ENST00000238616 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 IKBKGQ9Y6K9 419 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 PRC1O43663 620 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
NEK9-201ENST00000238616 ZNF622Q969S3 477 aaKnown RBP eCLIP15.3■□□□□ 0.04
NEK9-201ENST00000238616 KIF20AO95235 890 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 PDZRN3Q9UPQ7 1066 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 PSMC4P43686 418 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
NEK9-201ENST00000238616 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
NEK9-201ENST00000238616 RAB34Q9BZG1 259 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
NEK9-201ENST00000238616 NUTM1Q86Y26 1132 aa15.29■□□□□ 0.04
NEK9-201ENST00000238616 TAOK3Q9H2K8 898 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms