RNA–Protein interactions for RNA: ENST00000232508.9

CYB561D2-201, Transcript of cytochrome b561 family member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D2-201ENST00000232508 SLC15A2Q16348 729 aa24.72■■□□□ 1.55
CYB561D2-201ENST00000232508 GAS2L2Q8NHY3 880 aa24.72■■□□□ 1.55
CYB561D2-201ENST00000232508 SMARCC1Q92922 1105 aaPredicted RBP24.72■■□□□ 1.55
CYB561D2-201ENST00000232508 PLEKHF1Q96S99 279 aa24.72■■□□□ 1.55
CYB561D2-201ENST00000232508 PDGFDQ9GZP0 370 aaPredicted RBP24.72■■□□□ 1.55
CYB561D2-201ENST00000232508 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
CYB561D2-201ENST00000232508 C4BP0C0L5 1744 aa24.71■■□□□ 1.55
CYB561D2-201ENST00000232508 STK32BQ9NY57 414 aa24.7■■□□□ 1.54
CYB561D2-201ENST00000232508 UBR2Q8IWV8 1755 aa24.7■■□□□ 1.54
CYB561D2-201ENST00000232508 COL5A3P25940 1745 aaPredicted RBP24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 CEMIPQ8WUJ3 1361 aa24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 CABP4P57796 275 aa24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 SLC4A9Q96Q91 983 aa24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 SLC52A2Q9HAB3 445 aa24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 TJP1Q07157 1748 aa24.69■■□□□ 1.54
CYB561D2-201ENST00000232508 SRCAPQ6ZRS2 3230 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 KCPQ6ZWJ8 1503 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 LOC102724428A0A0B4J2F2 783 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 SIK1P57059 783 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 NFATC2IPQ8NCF5 419 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 IL17REQ8NFR9 667 aa24.68■■□□□ 1.54
CYB561D2-201ENST00000232508 ITPK1Q13572 414 aa24.67■■□□□ 1.54
CYB561D2-201ENST00000232508 UBR3Q6ZT12 1888 aa24.66■■□□□ 1.54
CYB561D2-201ENST00000232508 GNAT3A8MTJ3 354 aa24.66■■□□□ 1.54
CYB561D2-201ENST00000232508 COL24A1Q17RW2 1714 aa24.64■■□□□ 1.53
CYB561D2-201ENST00000232508 PNPLA7Q6ZV29 1317 aa24.63■■□□□ 1.53
CYB561D2-201ENST00000232508 LINC00116Q8NCU8 138 aa24.63■■□□□ 1.53
CYB561D2-201ENST00000232508 CCDC184Q52MB2 194 aa24.62■■□□□ 1.53
CYB561D2-201ENST00000232508 AMIGO3Q86WK7 504 aa24.62■■□□□ 1.53
CYB561D2-201ENST00000232508 MYH14Q7Z406 1995 aaKnown RBP24.61■■□□□ 1.53
CYB561D2-201ENST00000232508 SLC39A6Q13433 755 aa24.59■■□□□ 1.53
CYB561D2-201ENST00000232508 ATP6V1AP38606 617 aa24.58■■□□□ 1.53
CYB561D2-201ENST00000232508 NFE2L2Q16236 605 aa24.58■■□□□ 1.53
CYB561D2-201ENST00000232508 DCTN1Q14203 1278 aa24.57■■□□□ 1.52
CYB561D2-201ENST00000232508 MCM10Q7L590 875 aa24.57■■□□□ 1.52
CYB561D2-201ENST00000232508 PTCD1O75127 700 aaKnown RBP24.56■■□□□ 1.52
CYB561D2-201ENST00000232508 RBM42Q9BTD8 480 aaKnown RBP24.56■■□□□ 1.52
CYB561D2-201ENST00000232508 HTATSF1O43719 755 aaKnown RBP24.55■■□□□ 1.52
CYB561D2-201ENST00000232508 TFCP2L1Q9NZI6 479 aa24.55■■□□□ 1.52
CYB561D2-201ENST00000232508 ADAMTS8Q9UP79 889 aa24.55■■□□□ 1.52
CYB561D2-201ENST00000232508 ZBTB7AO95365 584 aa24.54■■□□□ 1.52
CYB561D2-201ENST00000232508 SGIP1Q9BQI5 828 aa24.54■■□□□ 1.52
CYB561D2-201ENST00000232508 KDM3BQ7LBC6 1761 aa24.54■■□□□ 1.52
CYB561D2-201ENST00000232508 PTGER2P43116 358 aa24.53■■□□□ 1.52
CYB561D2-201ENST00000232508 TEFQ10587 303 aa24.53■■□□□ 1.52
CYB561D2-201ENST00000232508 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
CYB561D2-201ENST00000232508 COL23A1Q86Y22 540 aaPredicted RBP24.53■■□□□ 1.52
CYB561D2-201ENST00000232508 MAPK8IP3Q9UPT6 1336 aa24.53■■□□□ 1.52
CYB561D2-201ENST00000232508 CCDC146Q8IYE0 955 aa24.52■■□□□ 1.52
CYB561D2-201ENST00000232508 CNTNAP4Q9C0A0 1308 aa24.52■■□□□ 1.52
CYB561D2-201ENST00000232508 KCNQ3O43525 872 aa24.51■■□□□ 1.51
CYB561D2-201ENST00000232508 WDR43Q15061 677 aaKnown RBP eCLIP24.51■■□□□ 1.51
CYB561D2-201ENST00000232508 PNNQ9H307 717 aaKnown RBP24.51■■□□□ 1.51
CYB561D2-201ENST00000232508 SPON1Q9HCB6 807 aa24.51■■□□□ 1.51
CYB561D2-201ENST00000232508 C4AP0C0L4 1744 aa24.51■■□□□ 1.51
CYB561D2-201ENST00000232508 ANP32CO43423 234 aa24.5■■□□□ 1.51
CYB561D2-201ENST00000232508 ZNF790Q6PG37 636 aa24.5■■□□□ 1.51
CYB561D2-201ENST00000232508 AK7Q96M32 723 aa24.5■■□□□ 1.51
CYB561D2-201ENST00000232508 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
CYB561D2-201ENST00000232508 MTFR1LQ9H019 292 aa24.5■■□□□ 1.51
CYB561D2-201ENST00000232508 TMPOP42166 694 aaKnown RBP24.49■■□□□ 1.51
CYB561D2-201ENST00000232508 DNAJC10Q8IXB1 793 aa24.49■■□□□ 1.51
CYB561D2-201ENST00000232508 RTF1Q92541 710 aaKnown RBP24.49■■□□□ 1.51
CYB561D2-201ENST00000232508 ZNF496Q96IT1 587 aaPredicted RBP24.49■■□□□ 1.51
CYB561D2-201ENST00000232508 NEFMP07197 916 aa24.48■■□□□ 1.51
CYB561D2-201ENST00000232508 HMGB2P26583 209 aaKnown RBP24.48■■□□□ 1.51
CYB561D2-201ENST00000232508 RC3H1Q5TC82 1133 aaKnown RBP24.48■■□□□ 1.51
CYB561D2-201ENST00000232508 RUNDC1Q96C34 613 aa24.48■■□□□ 1.51
CYB561D2-201ENST00000232508 HEG1Q9ULI3 1381 aa24.47■■□□□ 1.51
CYB561D2-201ENST00000232508 GNPATO15228 680 aa24.47■■□□□ 1.51
CYB561D2-201ENST00000232508 ATF5Q9Y2D1 282 aaPredicted RBP24.47■■□□□ 1.51
CYB561D2-201ENST00000232508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.46■■□□□ 1.51
CYB561D2-201ENST00000232508 SSFA2P28290 1259 aa24.46■■□□□ 1.51
CYB561D2-201ENST00000232508 CRKLP46109 303 aaKnown RBP24.46■■□□□ 1.51
CYB561D2-201ENST00000232508 VSIG10Q8N0Z9 540 aa24.46■■□□□ 1.51
CYB561D2-201ENST00000232508 SLC16A10Q8TF71 515 aa24.46■■□□□ 1.51
CYB561D2-201ENST00000232508 INTS5Q6P9B9 1019 aaKnown RBP24.45■■□□□ 1.5
CYB561D2-201ENST00000232508 RRP7AQ9Y3A4 280 aaKnown RBP24.45■■□□□ 1.5
CYB561D2-201ENST00000232508 BTBD11A6QL63 1104 aa24.44■■□□□ 1.5
CYB561D2-201ENST00000232508 PHF14O94880 888 aa24.44■■□□□ 1.5
CYB561D2-201ENST00000232508 CYP19A1P11511 503 aaPredicted RBP24.44■■□□□ 1.5
CYB561D2-201ENST00000232508 PNISRQ8TF01 805 aaKnown RBP24.44■■□□□ 1.5
CYB561D2-201ENST00000232508 RIPK4P57078 832 aa24.43■■□□□ 1.5
CYB561D2-201ENST00000232508 TTC5Q8N0Z6 440 aa24.43■■□□□ 1.5
CYB561D2-201ENST00000232508 FLAD1Q8NFF5 587 aa24.43■■□□□ 1.5
CYB561D2-201ENST00000232508 TRIM35Q9UPQ4 493 aa24.43■■□□□ 1.5
CYB561D2-201ENST00000232508 RPS6KA4O75676 772 aa24.42■■□□□ 1.5
CYB561D2-201ENST00000232508 TAF7Q15545 349 aaPredicted RBP24.41■■□□□ 1.5
CYB561D2-201ENST00000232508 MRS2Q9HD23 443 aa24.41■■□□□ 1.5
CYB561D2-201ENST00000232508 LAMB4A4D0S4 1761 aa24.41■■□□□ 1.5
CYB561D2-201ENST00000232508 MIS18AQ9NYP9 233 aa24.4■■□□□ 1.5
CYB561D2-201ENST00000232508 SOS1Q07889 1333 aaPredicted RBP24.39■■□□□ 1.5
CYB561D2-201ENST00000232508 FMNL2Q96PY5 1086 aa24.39■■□□□ 1.49
CYB561D2-201ENST00000232508 CCDC87Q9NVE4 849 aa24.39■■□□□ 1.49
CYB561D2-201ENST00000232508 ZBTB1Q9Y2K1 713 aa24.39■■□□□ 1.49
CYB561D2-201ENST00000232508 RTCBQ9Y3I0 505 aaKnown RBP24.39■■□□□ 1.49
CYB561D2-201ENST00000232508 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
CYB561D2-201ENST00000232508 ADRA2BP18089 450 aa24.38■■□□□ 1.49
CYB561D2-201ENST00000232508 MSL1Q68DK7 614 aa24.38■■□□□ 1.49
CYB561D2-201ENST00000232508 MSH5O43196 834 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms