RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 C5P01031 1676 aa18.41■□□□□ 0.54
VEGFA-201ENST00000230480 MYH14Q7Z406 1995 aaKnown RBP18.41■□□□□ 0.54
VEGFA-201ENST00000230480 HSP90AB1P08238 724 aaKnown RBP18.4■□□□□ 0.54
VEGFA-201ENST00000230480 NUDCQ9Y266 331 aa18.4■□□□□ 0.54
VEGFA-201ENST00000230480 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
VEGFA-201ENST00000230480 C1orf141Q5JVX7 400 aa18.39■□□□□ 0.53
VEGFA-201ENST00000230480 NBPF14Q5TI25 921 aa18.39■□□□□ 0.53
VEGFA-201ENST00000230480 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
VEGFA-201ENST00000230480 ZNF831Q5JPB2 1677 aa18.38■□□□□ 0.53
VEGFA-201ENST00000230480 SMIM5Q71RC9 77 aa18.38■□□□□ 0.53
VEGFA-201ENST00000230480 SLC52A2Q9HAB3 445 aa18.38■□□□□ 0.53
VEGFA-201ENST00000230480 CEMIPQ8WUJ3 1361 aa18.38■□□□□ 0.53
VEGFA-201ENST00000230480 LRP5O75197 1615 aa18.38■□□□□ 0.53
VEGFA-201ENST00000230480 LOC102724428A0A0B4J2F2 783 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 SIK1P57059 783 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 LINC00116Q8NCU8 138 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 MAP3K5Q99683 1374 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 COL24A1Q17RW2 1714 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 UBR3Q6ZT12 1888 aa18.37■□□□□ 0.53
VEGFA-201ENST00000230480 C4BP0C0L5 1744 aa18.36■□□□□ 0.53
VEGFA-201ENST00000230480 COL5A3P25940 1745 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-201ENST00000230480 CABP4P57796 275 aa18.36■□□□□ 0.53
VEGFA-201ENST00000230480 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-201ENST00000230480 UBR2Q8IWV8 1755 aa18.35■□□□□ 0.53
VEGFA-201ENST00000230480 TJP1Q07157 1748 aa18.35■□□□□ 0.53
VEGFA-201ENST00000230480 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
VEGFA-201ENST00000230480 GAS2L2Q8NHY3 880 aa18.35■□□□□ 0.53
VEGFA-201ENST00000230480 STK32BQ9NY57 414 aa18.35■□□□□ 0.53
VEGFA-201ENST00000230480 KCPQ6ZWJ8 1503 aa18.34■□□□□ 0.53
VEGFA-201ENST00000230480 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
VEGFA-201ENST00000230480 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
VEGFA-201ENST00000230480 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-201ENST00000230480 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
VEGFA-201ENST00000230480 ADAMTS8Q9UP79 889 aa18.33■□□□□ 0.52
VEGFA-201ENST00000230480 KCNQ3O43525 872 aa18.32■□□□□ 0.52
VEGFA-201ENST00000230480 PTGER2P43116 358 aa18.32■□□□□ 0.52
VEGFA-201ENST00000230480 COL23A1Q86Y22 540 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-201ENST00000230480 MCM10Q7L590 875 aa18.31■□□□□ 0.52
VEGFA-201ENST00000230480 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
VEGFA-201ENST00000230480 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
VEGFA-201ENST00000230480 ZBTB7AO95365 584 aa18.29■□□□□ 0.52
VEGFA-201ENST00000230480 NFE2L2Q16236 605 aa18.28■□□□□ 0.52
VEGFA-201ENST00000230480 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
VEGFA-201ENST00000230480 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
VEGFA-201ENST00000230480 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-201ENST00000230480 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
VEGFA-201ENST00000230480 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
VEGFA-201ENST00000230480 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
VEGFA-201ENST00000230480 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
VEGFA-201ENST00000230480 TFCP2L1Q9NZI6 479 aa18.26■□□□□ 0.51
VEGFA-201ENST00000230480 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
VEGFA-201ENST00000230480 INTS5Q6P9B9 1019 aaKnown RBP18.25■□□□□ 0.51
VEGFA-201ENST00000230480 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
VEGFA-201ENST00000230480 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
VEGFA-201ENST00000230480 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
VEGFA-201ENST00000230480 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
VEGFA-201ENST00000230480 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
VEGFA-201ENST00000230480 CYP19A1P11511 503 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-201ENST00000230480 RC3H1Q5TC82 1133 aaKnown RBP18.23■□□□□ 0.51
VEGFA-201ENST00000230480 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
VEGFA-201ENST00000230480 MIS18AQ9NYP9 233 aa18.23■□□□□ 0.51
VEGFA-201ENST00000230480 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
VEGFA-201ENST00000230480 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
VEGFA-201ENST00000230480 PELP1Q8IZL8 1130 aaKnown RBP18.22■□□□□ 0.51
VEGFA-201ENST00000230480 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
VEGFA-201ENST00000230480 C4AP0C0L4 1744 aa18.21■□□□□ 0.51
VEGFA-201ENST00000230480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.21■□□□□ 0.51
VEGFA-201ENST00000230480 CRKLP46109 303 aaKnown RBP18.21■□□□□ 0.51
VEGFA-201ENST00000230480 TEFQ10587 303 aa18.21■□□□□ 0.51
VEGFA-201ENST00000230480 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
VEGFA-201ENST00000230480 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
VEGFA-201ENST00000230480 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
VEGFA-201ENST00000230480 RIPK4P57078 832 aa18.2■□□□□ 0.5
VEGFA-201ENST00000230480 SLC16A10Q8TF71 515 aa18.2■□□□□ 0.5
VEGFA-201ENST00000230480 BTBD11A6QL63 1104 aa18.19■□□□□ 0.5
VEGFA-201ENST00000230480 GNPATO15228 680 aa18.19■□□□□ 0.5
VEGFA-201ENST00000230480 TAF7Q15545 349 aaPredicted RBP18.19■□□□□ 0.5
VEGFA-201ENST00000230480 VSIG10Q8N0Z9 540 aa18.19■□□□□ 0.5
VEGFA-201ENST00000230480 AK7Q96M32 723 aa18.19■□□□□ 0.5
VEGFA-201ENST00000230480 SSFA2P28290 1259 aa18.18■□□□□ 0.5
VEGFA-201ENST00000230480 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
VEGFA-201ENST00000230480 USP16Q9Y5T5 823 aa18.18■□□□□ 0.5
VEGFA-201ENST00000230480 ANP32CO43423 234 aa18.17■□□□□ 0.5
VEGFA-201ENST00000230480 PHF14O94880 888 aa18.17■□□□□ 0.5
VEGFA-201ENST00000230480 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
VEGFA-201ENST00000230480 PNNQ9H307 717 aaKnown RBP18.17■□□□□ 0.5
VEGFA-201ENST00000230480 ZBTB1Q9Y2K1 713 aa18.17■□□□□ 0.5
VEGFA-201ENST00000230480 APAF1O14727 1248 aa18.16■□□□□ 0.5
VEGFA-201ENST00000230480 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.58e-10■□□□□ 9.2
VEGFA-201ENST00000230480 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
VEGFA-201ENST00000230480 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
VEGFA-201ENST00000230480 CCDC87Q9NVE4 849 aa18.15■□□□□ 0.5
VEGFA-201ENST00000230480 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
VEGFA-201ENST00000230480 SENP3-EIF4A1A0A087X0R7 540 aa18.14■□□□□ 0.49
VEGFA-201ENST00000230480 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
VEGFA-201ENST00000230480 FLAD1Q8NFF5 587 aa18.14■□□□□ 0.49
VEGFA-201ENST00000230480 A1BGP04217 495 aa18.13■□□□□ 0.49
VEGFA-201ENST00000230480 EIF5P55010 431 aaKnown RBP18.13■□□□□ 0.49
VEGFA-201ENST00000230480 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms