RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
FRG1-201ENST00000226798 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
FRG1-201ENST00000226798 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
FRG1-201ENST00000226798 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.18
FRG1-201ENST00000226798 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
FRG1-201ENST00000226798 SSFA2P28290 1259 aa16.14■□□□□ 0.17
FRG1-201ENST00000226798 IGSF1Q8N6C5 1336 aa16.14■□□□□ 0.17
FRG1-201ENST00000226798 PHF14O94880 888 aa16.13■□□□□ 0.17
FRG1-201ENST00000226798 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
FRG1-201ENST00000226798 LINC00116Q8NCU8 138 aa16.13■□□□□ 0.17
FRG1-201ENST00000226798 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
FRG1-201ENST00000226798 COL5A3P25940 1745 aaPredicted RBP16.13■□□□□ 0.17
FRG1-201ENST00000226798 LOC102724428A0A0B4J2F2 783 aa16.12■□□□□ 0.17
FRG1-201ENST00000226798 SIK1P57059 783 aa16.12■□□□□ 0.17
FRG1-201ENST00000226798 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.12■□□□□ 0.17
FRG1-201ENST00000226798 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
FRG1-201ENST00000226798 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
FRG1-201ENST00000226798 PLEKHG2Q9H7P9 1386 aa16.11■□□□□ 0.17
FRG1-201ENST00000226798 ITPK1Q13572 414 aa16.1■□□□□ 0.17
FRG1-201ENST00000226798 IFFO2Q5TF58 517 aa16.1■□□□□ 0.17
FRG1-201ENST00000226798 EYA1Q99502 592 aa16.1■□□□□ 0.17
FRG1-201ENST00000226798 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
FRG1-201ENST00000226798 KDRP35968 1356 aa16.1■□□□□ 0.17
FRG1-201ENST00000226798 N4BP2Q86UW6 1770 aaPredicted RBP16.1■□□□□ 0.17
FRG1-201ENST00000226798 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
FRG1-201ENST00000226798 PCNTO95613 3336 aa16.09■□□□□ 0.17
FRG1-201ENST00000226798 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
FRG1-201ENST00000226798 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
FRG1-201ENST00000226798 C4AP0C0L4 1744 aa16.08■□□□□ 0.17
FRG1-201ENST00000226798 GNPATO15228 680 aa16.08■□□□□ 0.16
FRG1-201ENST00000226798 PPM1GO15355 546 aaPredicted RBP16.08■□□□□ 0.16
FRG1-201ENST00000226798 PHKG2P15735 406 aa16.08■□□□□ 0.16
FRG1-201ENST00000226798 HSPA6P17066 643 aa16.07■□□□□ 0.16
FRG1-201ENST00000226798 IFNL2Q8IZJ0 200 aa16.07■□□□□ 0.16
FRG1-201ENST00000226798 ZNF526Q8TF50 670 aaPredicted RBP16.07■□□□□ 0.16
FRG1-201ENST00000226798 WWC3Q9ULE0 1092 aa16.07■□□□□ 0.16
FRG1-201ENST00000226798 C10orf71Q711Q0 1435 aa16.06■□□□□ 0.16
FRG1-201ENST00000226798 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
FRG1-201ENST00000226798 ATG3Q9NT62 314 aa16.06■□□□□ 0.16
FRG1-201ENST00000226798 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
FRG1-201ENST00000226798 ZBTB12Q9Y330 459 aaPredicted RBP16.06■□□□□ 0.16
FRG1-201ENST00000226798 MYH14Q7Z406 1995 aaKnown RBP16.06■□□□□ 0.16
FRG1-201ENST00000226798 MMP10P09238 476 aa16.04■□□□□ 0.16
FRG1-201ENST00000226798 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
FRG1-201ENST00000226798 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
FRG1-201ENST00000226798 KIF3CO14782 793 aa16.03■□□□□ 0.16
FRG1-201ENST00000226798 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
FRG1-201ENST00000226798 SLC4A9Q96Q91 983 aa16.03■□□□□ 0.16
FRG1-201ENST00000226798 KDM6AO15550 1401 aaPredicted RBP16.02■□□□□ 0.15
FRG1-201ENST00000226798 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
FRG1-201ENST00000226798 CNTNAP4Q9C0A0 1308 aa16■□□□□ 0.15
FRG1-201ENST00000226798 TJP1Q07157 1748 aa16■□□□□ 0.15
FRG1-201ENST00000226798 ERVV-2B6SEH9 535 aa16■□□□□ 0.15
FRG1-201ENST00000226798 TGFB2P61812 414 aa16■□□□□ 0.15
FRG1-201ENST00000226798 TRAPPC3LQ5T215 181 aa15.99■□□□□ 0.15
FRG1-201ENST00000226798 RC3H1Q5TC82 1133 aaKnown RBP15.99■□□□□ 0.15
FRG1-201ENST00000226798 NLGN1Q8N2Q7 840 aa15.99■□□□□ 0.15
FRG1-201ENST00000226798 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
FRG1-201ENST00000226798 GYS1P13807 737 aa15.98■□□□□ 0.15
FRG1-201ENST00000226798 ARHGEF1Q92888 912 aaKnown RBP15.98■□□□□ 0.15
FRG1-201ENST00000226798 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
FRG1-201ENST00000226798 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
FRG1-201ENST00000226798 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
FRG1-201ENST00000226798 HSP90AB1P08238 724 aaKnown RBP15.97■□□□□ 0.15
FRG1-201ENST00000226798 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
FRG1-201ENST00000226798 RPS6KA4O75676 772 aa15.96■□□□□ 0.15
FRG1-201ENST00000226798 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
FRG1-201ENST00000226798 WDR90Q96KV7 1748 aa15.96■□□□□ 0.15
FRG1-201ENST00000226798 DPEP1P16444 411 aa15.95■□□□□ 0.14
FRG1-201ENST00000226798 CCDC87Q9NVE4 849 aa15.95■□□□□ 0.14
FRG1-201ENST00000226798 TIMELESSQ9UNS1 1208 aa15.95■□□□□ 0.14
FRG1-201ENST00000226798 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
FRG1-201ENST00000226798 TOMM70O94826 608 aa15.94■□□□□ 0.14
FRG1-201ENST00000226798 RFC4P35249 363 aa15.94■□□□□ 0.14
FRG1-201ENST00000226798 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
FRG1-201ENST00000226798 ZNF530Q6P9A1 599 aaPredicted RBP15.94■□□□□ 0.14
FRG1-201ENST00000226798 SBF1O95248 1867 aa15.93■□□□□ 0.14
FRG1-201ENST00000226798 KCNA3P22001 575 aa15.93■□□□□ 0.14
FRG1-201ENST00000226798 APLP1P51693 650 aa15.93■□□□□ 0.14
FRG1-201ENST00000226798 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
FRG1-201ENST00000226798 PARP3Q9Y6F1 533 aa15.93■□□□□ 0.14
FRG1-201ENST00000226798 FCHSD2O94868 740 aa15.92■□□□□ 0.14
FRG1-201ENST00000226798 CABP4P57796 275 aa15.92■□□□□ 0.14
FRG1-201ENST00000226798 ARHGAP27Q6ZUM4 889 aa15.92■□□□□ 0.14
FRG1-201ENST00000226798 TNRC6CQ9HCJ0 1690 aaKnown RBP15.92■□□□□ 0.14
FRG1-201ENST00000226798 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
FRG1-201ENST00000226798 TRIM26Q12899 539 aaPredicted RBP15.91■□□□□ 0.14
FRG1-201ENST00000226798 AEBP1Q8IUX7 1158 aa15.91■□□□□ 0.14
FRG1-201ENST00000226798 NMRK2Q9NPI5 230 aa15.91■□□□□ 0.14
FRG1-201ENST00000226798 DLEC1Q9Y238 1755 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
FRG1-201ENST00000226798 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
FRG1-201ENST00000226798 DDR1Q08345 913 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 DNAJC5GQ8N7S2 189 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 NRXN2Q9P2S2 1712 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 MRC1P22897 1456 aa15.9■□□□□ 0.14
FRG1-201ENST00000226798 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
FRG1-201ENST00000226798 MTHFSP49914 203 aa15.89■□□□□ 0.13
FRG1-201ENST00000226798 FKBP8Q14318 412 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms