RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Ptpdc1Q6NZK8 747 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ccdc7Q9D541 371 aa15.98■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Smarce1O54941 411 aaKnown RBP15.97■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Psme1P97371 249 aa15.97■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Rad17Q6NXW6 688 aa15.97■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Foxp4Q9DBY0 795 aaKnown RBP15.97■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ubr1O70481 1757 aa15.97■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Kif4P33174 1231 aa15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Nol11Q8BJW5 723 aaKnown RBP15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Gripap1Q8VD04 806 aa15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Erich6bQ9D4S6 220 aa15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ripk4Q9ERK0 786 aa15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Arap3Q8R5G7 1538 aa15.96■□□□□ 0.15
Ssr1-203ENSMUST00000225246 Ddx19aQ61655 478 aaKnown RBP15.96■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Mum1Q6DID5 682 aa15.96■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Ppp1r42Q8R1Z4 357 aa15.96■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Col16a1Q8BLX7 1580 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Strn4P58404 760 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Ggnbp2Q5SV77 696 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Filip1lQ6P6L0 1131 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 St18Q80TY4 1045 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Mknk2Q8CDB0 459 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Rcan3Q9JKK0 239 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Erbb4Q61527 1308 aa15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Chd2E9PZM4 1827 aaKnown RBP15.95■□□□□ 0.14
Ssr1-203ENSMUST00000225246 1700019A02RikA0A087WPV9 146 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Zscan25B2RX31 543 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Mcmdc2E9Q956 681 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Prim1P20664 417 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Srgap3Q812A2 1099 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Plin1Q8CGN5 517 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Pnma3Q8JZW8 466 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Scn7aB1AYL1 1681 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 IghaA0A0A6YXW6 389 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Syce3B5KM66 88 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Vsig10D3YX43 558 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 KinQ8K339 391 aa15.94■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Pik3c2aQ61194 1686 aa15.93■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Utp18Q5SSI6 552 aaKnown RBP15.93■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Map2P20357 1828 aa15.93■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Brpf1B2RRD7 1212 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Atf5O70191 283 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Ms4a2P20490 235 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Gadd45bP22339 160 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Scaf1Q5U4C3 1256 aaKnown RBP15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 E4f1Q8CCE9 783 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Pnpla7A2AJ88 1352 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Camta1A2A891 1682 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Myo5bP21271 1818 aa15.92■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Hmox1P14901 289 aa15.91■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Mon2Q80TL7 1715 aa15.91■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Prune1Q8BIW1 454 aa15.91■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Ccdc173A0JLY1 547 aa15.91■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Fam83gQ5SWY7 812 aa15.91■□□□□ 0.14
Ssr1-203ENSMUST00000225246 EvcP57680 1005 aa15.9■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Mindy4Q3UQI9 744 aa15.9■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Ccne1Q61457 408 aa15.9■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Anp32cQ64G17 123 aa15.9■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Txndc2Q6P902 515 aa15.9■□□□□ 0.14
Ssr1-203ENSMUST00000225246 Pdia4P08003 638 aaKnown RBP15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Tbc1d31Q6NXY1 996 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Pmfbp1Q9WVQ0 1022 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Adamtsl3G3UXC7 1706 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Parp14Q2EMV9 1817 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Fam184aE9PW83 1143 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Gzf1Q4VBD9 706 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Pdzrn3Q69ZS0 1063 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Disp3A3KFU9 1347 aa15.89■□□□□ 0.13
Ssr1-203ENSMUST00000225246 PtprvP70289 1705 aa15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Rreb1Q3UH06 1700 aaKnown RBP15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Pibf1E9Q6K3 756 aa15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Eya1P97767 591 aa15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Nom1Q3UFM5 854 aaKnown RBP15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Rtn4Q99P72 1162 aaKnown RBP15.88■□□□□ 0.13
Ssr1-203ENSMUST00000225246 CalcaP70160 136 aa15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Ints3Q7TPD0 1041 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Ccar2Q8VDP4 922 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Tpx2A2APB8 745 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Phactr2B1AVP0 632 aa15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Elmsan1E9Q2I4 1089 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Hsp90b1P08113 802 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Pank2Q3U4S0 443 aa15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Q3UJC8 639 aa15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Unc5clQ6R653 518 aa15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 SrrtQ99MR6 875 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 HnrnpmQ9D0E1 729 aaKnown RBP15.87■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Rad50P70388 1312 aa15.86■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Abcc10Q8R4P9 1501 aa15.86■□□□□ 0.13
Ssr1-203ENSMUST00000225246 NcapgE9PWG6 1004 aa15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Cwc27Q3TKY6 469 aa15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Q3TQI7 289 aaKnown RBP15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Wdr93Q402B2 695 aa15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Rbm27Q5SFM8 1060 aaKnown RBP15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Cc2d1aQ8K1A6 943 aa15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Atg3Q9CPX6 314 aa15.85■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Cnksr1A2A9K7 700 aa15.84■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Fbxo41Q6NS60 873 aa15.84■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Klhl34A2AI76 644 aa15.84■□□□□ 0.13
Ssr1-203ENSMUST00000225246 Snap23O09044 210 aa15.84■□□□□ 0.13
Ssr1-203ENSMUST00000225246 MyclP10166 368 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms