RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Eif4a1P60843 406 aaKnown RBP34.43■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Aox2Q5SGK3 1345 aa34.43■■■■□ 3.1
Ldb1-208ENSMUST00000185355 CoilQ5SU73 570 aa34.43■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Farp2Q91VS8 1065 aa34.43■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Nphp1Q9QY53 687 aa34.42■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Simc1E9Q6E9 1354 aa34.41■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Srgap3Q812A2 1099 aa34.4■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Dzip1Q8BMD2 852 aa34.4■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Tnnt1O88346 262 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Col1a2Q01149 1372 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Hoxa7P02830 229 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Atp8b2P98199 1209 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Ppp1r42Q8R1Z4 357 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Ppp6r3Q922D4 844 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Bcl11aQ9QYE3 773 aa34.39■■■■□ 3.1
Ldb1-208ENSMUST00000185355 Tfip11Q9ERA6 838 aaKnown RBP34.38■■■■□ 3.09
Ldb1-208ENSMUST00000185355 GorabQ8BRM2 368 aa34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Evi5lH3BKQ3 813 aa34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Mmp8O70138 465 aa34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Nucb1Q02819 459 aaKnown RBP34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Nol11Q8BJW5 723 aaKnown RBP34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Cc2d1aQ8K1A6 943 aa34.37■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Pdia3P27773 505 aaKnown RBP34.36■■■■□ 3.09
Ldb1-208ENSMUST00000185355 4933416C03RikQ3V063 378 aa34.36■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Kdm4cQ8VCD7 1054 aa34.35■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Antxr1Q9CZ52 562 aa34.35■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Btbd11Q6GQW0 1109 aa34.35■■■■□ 3.09
Ldb1-208ENSMUST00000185355 1700010I14RikQ7TPG0 532 aa34.34■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Ppip5k2Q6ZQB6 1129 aa34.34■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Atg3Q9CPX6 314 aa34.34■■■■□ 3.09
Ldb1-208ENSMUST00000185355 Cyp2d11P24457 504 aa34.33■■■■□ 3.09
Ldb1-208ENSMUST00000185355 TkfcQ8VC30 578 aa34.32■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Echdc1Q9D9V3 322 aa34.32■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Col15a1O35206 1367 aa34.31■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Elp1Q7TT37 1333 aaKnown RBP34.29■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Zkscan2G3X952 960 aa34.29■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Arhgef1Q61210 920 aaKnown RBP34.28■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Dixdc1Q80Y83 711 aa34.28■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Cwc27Q3TKY6 469 aa34.27■■■■□ 3.08
Ldb1-208ENSMUST00000185355 PsapQ61207 557 aaKnown RBP34.27■■■■□ 3.08
Ldb1-208ENSMUST00000185355 GnpatP98192 678 aa34.27■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Gm10471E9Q1C7 252 aa34.26■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Mcmdc2E9Q956 681 aa34.26■■■■□ 3.08
Ldb1-208ENSMUST00000185355 Tmem119Q8R138 280 aa34.26■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Atf3Q60765 181 aa34.25■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Nkx2-3P97334 362 aa34.24■■■■□ 3.07
Ldb1-208ENSMUST00000185355 EngaseQ8BX80 734 aa34.24■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Irx6Q9ER75 438 aa34.24■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Bcar3Q9QZK2 820 aa34.24■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Rsph3aQ3UFY4 516 aa34.24■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Rnf123Q5XPI3 1314 aa34.23■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Q9D2X8 372 aa34.23■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Bend3Q6PAL0 825 aa34.22■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Rfx1P48377 963 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Ptpdc1Q6NZK8 747 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Erc2Q6PH08 957 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 OptnQ8K3K8 584 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Tnks1bp1P58871 1720 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Fkbp4P30416 458 aa34.21■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Nsfl1cQ9CZ44 370 aaKnown RBP34.2■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Atp10bB1AWN4 1474 aa34.2■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Adcy9P51830 1353 aa34.2■■■■□ 3.07
Ldb1-208ENSMUST00000185355 Ier5O89113 308 aa34.19■■■■□ 3.06
Ldb1-208ENSMUST00000185355 FocadA2AKG8 1798 aa34.19■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Gm21698A0A087WQP8 267 aa34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Gm21671G3UY31 267 aa34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Card10P58660 1021 aa34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Noc3lQ8VI84 807 aaKnown RBP34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 GckrQ91X44 587 aa34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 ThemisQ8BGW0 636 aa34.18■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Flt4P35917 1363 aa34.17■■■■□ 3.06
Ldb1-208ENSMUST00000185355 CrklP47941 303 aa34.17■■■■□ 3.06
Ldb1-208ENSMUST00000185355 RestQ8VIG1 1082 aa34.16■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Pdzd9Q9D9M4 266 aa34.16■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Rapgef3Q8VCC8 918 aa34.16■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Tns2Q8CGB6 1400 aa34.15■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Bcl9lQ67FY2 1494 aa34.14■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Exoc6bA6H5Z3 810 aa34.14■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Zap70P43404 618 aa34.14■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Taf7Q9R1C0 341 aa34.14■■■■□ 3.06
Ldb1-208ENSMUST00000185355 Eif3aP23116 1344 aaKnown RBP34.13■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Hmox1P14901 289 aa34.12■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Scn4aQ9ER60 1841 aa34.11■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Mphosph10Q810V0 681 aaKnown RBP34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Mrps27Q8BK72 415 aaKnown RBP34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Chmp7Q8R1T1 451 aa34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Phkg2Q9DB30 406 aa34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Abca15E9PWH4 1668 aa34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Ubr2Q6WKZ8 1755 aa34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Cfdp1O88271 295 aaKnown RBP34.1■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Cct4P80315 539 aaKnown RBP34.09■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Nol8Q3UHX0 1147 aaKnown RBP34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 DccP70211 1447 aa34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Casq1O09165 405 aa34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Map3k2Q61083 619 aa34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Tceal9Q9DD24 104 aa34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 Slit1Q80TR4 1531 aa34.08■■■■□ 3.05
Ldb1-208ENSMUST00000185355 HellsQ60848 821 aa34.07■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Morc2aQ69ZX6 1030 aa34.07■■■■□ 3.04
Ldb1-208ENSMUST00000185355 Ccdc155Q80VJ8 648 aa34.07■■■■□ 3.04
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms