RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 CenppQ9CZ92 286 aa7.72□□□□□ -1.17
Lig4-202ENSMUST00000170033 Camta1A2A891 1682 aa7.71□□□□□ -1.17
Lig4-202ENSMUST00000170033 Siglec1Q62230 1695 aa7.71□□□□□ -1.17
Lig4-202ENSMUST00000170033 Chl1P70232 1209 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Stk31Q99MW1 1018 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Phf14Q9D4H9 881 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Wdr63B2RY71 923 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Psme1P97371 249 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Ano8Q6PB70 1060 aa7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Elp1Q7TT37 1333 aaKnown RBP7.71□□□□□ -1.18
Lig4-202ENSMUST00000170033 Wnk3Q80XP9 1757 aa7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Parp14Q2EMV9 1817 aa7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Rsph3aQ3UFY4 516 aa7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Tnpo1Q8BFY9 898 aaKnown RBP7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Terf2O35144 541 aa7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Eif4g2Q62448 906 aaKnown RBP7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 MlecQ6ZQI3 291 aaKnown RBP7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 FancaQ9JL70 1439 aa7.7□□□□□ -1.18
Lig4-202ENSMUST00000170033 Prr29B1ARI9 187 aa7.69□□□□□ -1.18
Lig4-202ENSMUST00000170033 Lekr1B2RVN1 116 aa7.69□□□□□ -1.18
Lig4-202ENSMUST00000170033 Prdm4Q80V63 803 aa7.69□□□□□ -1.18
Lig4-202ENSMUST00000170033 AdnpQ9Z103 1108 aaKnown RBP7.69□□□□□ -1.18
Lig4-202ENSMUST00000170033 CarsQ9ER72 831 aaKnown RBP7.69□□□□□ -1.18
Lig4-202ENSMUST00000170033 Col22a1E9Q7P1 1613 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 AU019823E9PUQ3 292 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Trim27Q62158 513 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Clcn1Q64347 994 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 SelenooQ9DBC0 667 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Stk3Q9JI10 497 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Col14a1Q80X19 1797 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Kif2cQ922S8 721 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Zbtb12Q9Z150 459 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Kif24Q6NWW5 1356 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 Abcc12Q80WJ6 1366 aa7.68□□□□□ -1.18
Lig4-202ENSMUST00000170033 MccE9PWI3 1003 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 TraipQ8VIG6 470 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Ahnak2E9PYB0 1738 aaKnown RBP7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Stk36Q69ZM6 1316 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Lmod3E9QA62 571 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Sema3fO88632 785 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Ap3b2Q9JME5 1082 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Thsd7aQ69ZU6 1645 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Msh6P54276 1358 aaKnown RBP7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Eif4a2P10630 407 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Sugp2Q8CH09 1067 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Smarca5Q91ZW3 1051 aaKnown RBP7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Kdm6aO70546 1401 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Nid2O88322 1403 aa7.67□□□□□ -1.18
Lig4-202ENSMUST00000170033 Q3UJC8 639 aa7.66□□□□□ -1.18
Lig4-202ENSMUST00000170033 Txndc2Q6P902 515 aa7.66□□□□□ -1.18
Lig4-202ENSMUST00000170033 Usp16Q99LG0 825 aa7.66□□□□□ -1.18
Lig4-202ENSMUST00000170033 Gli3Q61602 1583 aa7.66□□□□□ -1.18
Lig4-202ENSMUST00000170033 Rrp12Q6P5B0 1295 aaKnown RBP7.66□□□□□ -1.18
Lig4-202ENSMUST00000170033 Mrps27Q8BK72 415 aaKnown RBP7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Mknk2Q8CDB0 459 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Cluap1Q8R3P7 413 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Casz1Q9CWL2 1761 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Gsdma3Q5Y4Y6 464 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Ric3Q8BPM6 367 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Glipr1l2Q9CQ35 332 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Fam114a1Q9D281 569 aa7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Nup153E9Q3G8 1462 aaKnown RBP7.65□□□□□ -1.18
Lig4-202ENSMUST00000170033 Gm10354K7N6A0 256 aa7.65□□□□□ -1.19
Lig4-202ENSMUST00000170033 Cog6Q8R3I3 657 aa7.65□□□□□ -1.19
Lig4-202ENSMUST00000170033 Atg3Q9CPX6 314 aa7.65□□□□□ -1.19
Lig4-202ENSMUST00000170033 Anapc15P60007 132 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Pde3bQ61409 1100 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Fnbp4Q6ZQ03 1031 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Brpf1B2RRD7 1212 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Birc3O08863 600 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Foxp4Q9DBY0 795 aaKnown RBP7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Nfat5Q9WV30 1534 aa7.64□□□□□ -1.19
Lig4-202ENSMUST00000170033 Arhgap4B1AUY3 965 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Mcm4P49717 862 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Tbc1d9Q3UYK3 1264 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 1700017N19RikA0A087WPJ1 469 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Nucb1Q02819 459 aaKnown RBP7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Rbm27Q5SFM8 1060 aaKnown RBP7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Morc2aQ69ZX6 1030 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Kiaa0753Q6A000 959 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Kank4Q6P9J5 1016 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 SetQ9EQU5 289 aaKnown RBP7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Ppp1r3fQ9JIG4 799 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Catsper2A2ARP9 588 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Dhx16G3X8X0 1044 aaKnown RBP7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Atf5O70191 283 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 TmpoQ61033 693 aaKnown RBP7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Zranb1Q7M760 708 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Fam13aQ8BGI4 693 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Gimap6Q8K349 305 aa7.63□□□□□ -1.19
Lig4-202ENSMUST00000170033 Gm6268A2A3U9 297 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Cnksr1A2A9K7 700 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Casq1O09165 405 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Atp6v1dP57746 247 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Bms1Q6PGF5 1284 aaKnown RBP7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 HypkQ9CR41 129 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Cabp2Q9JLK4 216 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 C3P01027 1663 aa7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Rtf1A2AQ19 715 aaKnown RBP7.62□□□□□ -1.19
Lig4-202ENSMUST00000170033 Zkscan2G3X952 960 aa7.62□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms