RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Grpel1Q99LP6 217 aa17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Yeats2Q3TUF7 1407 aa17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Gemin5Q8BX17 1502 aaKnown RBP17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Gm45140A0A0N4SUM8 220 aa17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Cpa2Q504N0 417 aa17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Chd4Q6PDQ2 1915 aaKnown RBP17.75■□□□□ 0.43
Vcan-205ENSMUST00000159337 Hvcn1Q3U2S8 269 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 KinQ8K339 391 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Ccar2Q8VDP4 922 aaKnown RBP17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Noc3lQ8VI84 807 aaKnown RBP17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Ccdc94Q9D6J3 314 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Nphp1Q9QY53 687 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Eif4a2P10630 407 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Strn4P58404 760 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Chrna2Q91X60 512 aa17.74■□□□□ 0.43
Vcan-205ENSMUST00000159337 Hmox1P14901 289 aa17.73■□□□□ 0.43
Vcan-205ENSMUST00000159337 Utp18Q5SSI6 552 aaKnown RBP17.73■□□□□ 0.43
Vcan-205ENSMUST00000159337 Gnai2P08752 355 aaKnown RBP17.73■□□□□ 0.43
Vcan-205ENSMUST00000159337 1700019A02RikA0A087WPV9 146 aa17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Zc3h13E9Q784 1729 aaKnown RBP17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Mmp8O70138 465 aa17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Plin1Q8CGN5 517 aa17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Dip2aQ8BWT5 1523 aa17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Ptgs1P22437 602 aa17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Dhx30Q99PU8 1217 aaKnown RBP17.72■□□□□ 0.43
Vcan-205ENSMUST00000159337 Elmsan1E9Q2I4 1089 aaKnown RBP17.71■□□□□ 0.43
Vcan-205ENSMUST00000159337 Srgap3Q812A2 1099 aa17.71■□□□□ 0.43
Vcan-205ENSMUST00000159337 SrrtQ99MR6 875 aaKnown RBP17.71■□□□□ 0.43
Vcan-205ENSMUST00000159337 Hoxa7P02830 229 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Hsp90b1P08113 802 aaKnown RBP17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 MsnP26041 577 aaKnown RBP17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Wdr93Q402B2 695 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Pdzrn3Q69ZS0 1063 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Casc1Q6TDU8 730 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Chmp4cQ9D7F7 232 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Tnnt2P50752 301 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 MpripP97434 1024 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Zfp51Q3U4L8 781 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Sv2bQ8BG39 683 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Tshz3Q8CGV9 1081 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ppp1r42Q8R1Z4 357 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Mx2Q9WVP9 655 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Slit2Q9R1B9 1521 aa17.7■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ms4a2P20490 235 aa17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 EzrP26040 586 aaKnown RBP17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 Adcy5P84309 1262 aa17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 IbspQ61711 324 aa17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ercc6l2Q9JIM3 1537 aa17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 Msh6P54276 1358 aaKnown RBP17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 Cc2d1aQ8K1A6 943 aa17.69■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ints3Q7TPD0 1041 aaKnown RBP17.68■□□□□ 0.42
Vcan-205ENSMUST00000159337 Pmfbp1Q9WVQ0 1022 aa17.68■□□□□ 0.42
Vcan-205ENSMUST00000159337 FancaQ9JL70 1439 aa17.68■□□□□ 0.42
Vcan-205ENSMUST00000159337 NalcnQ8BXR5 1738 aa17.68■□□□□ 0.42
Vcan-205ENSMUST00000159337 Cavin1O54724 392 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ggnbp2Q5SV77 696 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Znf316Q6PGE4 1016 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Fbxo2Q80UW2 297 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Jakmip1Q8BVL9 626 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Med4Q9CQA5 270 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 PzpQ61838 1495 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Stk36Q69ZM6 1316 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Pibf1E9Q6K3 756 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Ube2hP62257 183 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Atp8b2P98199 1209 aa17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 TmpoQ61033 693 aaKnown RBP17.67■□□□□ 0.42
Vcan-205ENSMUST00000159337 Igsf1Q7TQA1 1317 aa17.66■□□□□ 0.42
Vcan-205ENSMUST00000159337 Cps1Q8C196 1500 aa17.66■□□□□ 0.42
Vcan-205ENSMUST00000159337 CatipB9EKE5 520 aa17.66■□□□□ 0.42
Vcan-205ENSMUST00000159337 Slx4ipQ9D7Y9 413 aa17.65■□□□□ 0.42
Vcan-205ENSMUST00000159337 Kiaa0753Q6A000 959 aa17.65■□□□□ 0.42
Vcan-205ENSMUST00000159337 Zscan22Q8BGS5 496 aa17.65■□□□□ 0.42
Vcan-205ENSMUST00000159337 Irx4Q9QY61 515 aa17.65■□□□□ 0.42
Vcan-205ENSMUST00000159337 Tnrc6bQ8BKI2 1810 aaKnown RBP17.65■□□□□ 0.42
Vcan-205ENSMUST00000159337 Astn2Q80Z10 1352 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Myo5bP21271 1818 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Klhl34A2AI76 644 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Mcmdc2E9Q956 681 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Ccne1Q61457 408 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Zfp804bA0A0G2JGH6 1343 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Rad50P70388 1312 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Trpm3Q5F4S9 1721 aa17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Tpx2A2APB8 745 aaKnown RBP17.64■□□□□ 0.41
Vcan-205ENSMUST00000159337 Brpf1B2RRD7 1212 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Prim1P20664 417 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Fam83gQ5SWY7 812 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Bms1Q6PGF5 1284 aaKnown RBP17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Unc5clQ6R653 518 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Samm50Q8BGH2 469 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Pik3c2bE9QAN8 1632 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Nol12Q8BG17 217 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Ccdc178Q8CDV0 866 aa17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Rbm42Q91V81 474 aaKnown RBP17.63■□□□□ 0.41
Vcan-205ENSMUST00000159337 Kank4Q6P9J5 1016 aa17.62■□□□□ 0.41
Vcan-205ENSMUST00000159337 Stx6Q9JKK1 255 aa17.62■□□□□ 0.41
Vcan-205ENSMUST00000159337 Oxsr1Q6P9R2 527 aa17.61■□□□□ 0.41
Vcan-205ENSMUST00000159337 Cfap73J3QPZ5 306 aa17.61■□□□□ 0.41
Vcan-205ENSMUST00000159337 Nucb2P81117 420 aa17.61■□□□□ 0.41
Vcan-205ENSMUST00000159337 Zfp251Q6PCX8 632 aa17.61■□□□□ 0.41
Vcan-205ENSMUST00000159337 Naa30Q8CES0 364 aa17.61■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 10.3 ms