RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 FanclQ9CR14 375 aa33.92■■■■□ 3.02
Ldb1-207ENSMUST00000156585 CrklP47941 303 aa33.92■■■■□ 3.02
Ldb1-207ENSMUST00000156585 CoilQ5SU73 570 aa33.92■■■■□ 3.02
Ldb1-207ENSMUST00000156585 Col1a2Q01149 1372 aa33.92■■■■□ 3.02
Ldb1-207ENSMUST00000156585 Amigo3Q8C2S7 508 aa33.91■■■■□ 3.02
Ldb1-207ENSMUST00000156585 ScaperF8VQ70 1398 aaKnown RBP33.9■■■■□ 3.02
Ldb1-207ENSMUST00000156585 DccP70211 1447 aa33.9■■■■□ 3.02
Ldb1-207ENSMUST00000156585 Stk36Q69ZM6 1316 aa33.88■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Ccdc146E9Q9F7 977 aa33.87■■■■□ 3.01
Ldb1-207ENSMUST00000156585 ThemisQ8BGW0 636 aa33.87■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Nkx2-3P97334 362 aa33.87■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Irx6Q9ER75 438 aa33.87■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Arhgef1Q61210 920 aaKnown RBP33.86■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Bcl9lQ67FY2 1494 aa33.85■■■■□ 3.01
Ldb1-207ENSMUST00000156585 BcorQ8CGN4 1759 aa33.85■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Tnpo1Q8BFY9 898 aaKnown RBP33.85■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Cyp2d11P24457 504 aa33.83■■■■□ 3.01
Ldb1-207ENSMUST00000156585 PsapQ61207 557 aaKnown RBP33.82■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Pdzd9Q9D9M4 266 aa33.82■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Echdc1Q9D9V3 322 aa33.82■■■■□ 3.01
Ldb1-207ENSMUST00000156585 Tbc1d9Q3UYK3 1264 aa33.82■■■■□ 3
Ldb1-207ENSMUST00000156585 Nek4Q9Z1J2 792 aa33.81■■■■□ 3
Ldb1-207ENSMUST00000156585 Abca15E9PWH4 1668 aa33.81■■■■□ 3
Ldb1-207ENSMUST00000156585 Atp8b2P98199 1209 aa33.8■■■■□ 3
Ldb1-207ENSMUST00000156585 Zranb3Q6NZP1 1069 aa33.8■■■■□ 3
Ldb1-207ENSMUST00000156585 Smarca5Q91ZW3 1051 aaKnown RBP33.8■■■■□ 3
Ldb1-207ENSMUST00000156585 CenppQ9CZ92 286 aa33.8■■■■□ 3
Ldb1-207ENSMUST00000156585 Atg4a-psA0A0G2JFS9 396 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Fkbp4P30416 458 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Atg4aQ8C9S8 396 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Cc2d1aQ8K1A6 943 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Tmem119Q8R138 280 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Kif2cQ922S8 721 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Atg3Q9CPX6 314 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Srgap3Q812A2 1099 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Ppp1r42Q8R1Z4 357 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 Nphp1Q9QY53 687 aa33.79■■■■□ 3
Ldb1-207ENSMUST00000156585 FocadA2AKG8 1798 aa33.78■■■■□ 3
Ldb1-207ENSMUST00000156585 Phkg2Q9DB30 406 aa33.77■■■■□ 3
Ldb1-207ENSMUST00000156585 Slit1Q80TR4 1531 aa33.77■■■■□ 3
Ldb1-207ENSMUST00000156585 Chmp7Q8R1T1 451 aa33.77■■■■□ 3
Ldb1-207ENSMUST00000156585 Tnks1bp1P58871 1720 aa33.76■■■■□ 3
Ldb1-207ENSMUST00000156585 ArxO35085 564 aa33.76■■■■□ 3
Ldb1-207ENSMUST00000156585 GckrQ91X44 587 aa33.76■■■■□ 3
Ldb1-207ENSMUST00000156585 Tns2Q8CGB6 1400 aa33.76■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Anapc15-psA0A140T8L6 141 aa33.75■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Cyp46a1Q9WVK8 500 aa33.75■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Brinp3Q499E0 766 aa33.75■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Mmp8O70138 465 aa33.73■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Ccdc155Q80VJ8 648 aa33.73■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Cadps2Q8BYR5 1297 aa33.73■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Taf7Q9R1C0 341 aa33.72■■■□□ 2.99
Ldb1-207ENSMUST00000156585 4930572O03RikQ8C5Y0 211 aa33.71■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Atp10bB1AWN4 1474 aa33.71■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Gm10093D3YYI8 482 aa33.7■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Hdac1O09106 482 aaKnown RBP33.7■■■□□ 2.99
Ldb1-207ENSMUST00000156585 RgmbQ7TQ33 436 aa33.7■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Bend3Q6PAL0 825 aa33.7■■■□□ 2.99
Ldb1-207ENSMUST00000156585 Plekhd1B2RPU2 505 aa33.69■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Cwc27Q3TKY6 469 aa33.69■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Hoxa7P02830 229 aa33.68■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Adcy9P51830 1353 aa33.67■■■□□ 2.98
Ldb1-207ENSMUST00000156585 HdgfP51859 237 aaKnown RBP33.67■■■□□ 2.98
Ldb1-207ENSMUST00000156585 ZgpatQ8VDM1 511 aa33.66■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Fam50bQ9WTJ8 334 aa33.65■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Exoc6bA6H5Z3 810 aa33.65■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Mcmdc2E9Q956 681 aa33.65■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Bcl2l13P59017 434 aa33.65■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Flt4P35917 1363 aa33.65■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Zap70P43404 618 aa33.64■■■□□ 2.98
Ldb1-207ENSMUST00000156585 SympkQ80X82 1284 aa33.64■■■□□ 2.98
Ldb1-207ENSMUST00000156585 Ssfa2Q922B9 1252 aa33.63■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Ubr2Q6WKZ8 1755 aa33.62■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Pdia3P27773 505 aaKnown RBP33.62■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Iqsec3Q3TES0 1195 aa33.62■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Mphosph10Q810V0 681 aaKnown RBP33.62■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Cfdp1O88271 295 aaKnown RBP33.61■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Ier5O89113 308 aa33.61■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Morc2aQ69ZX6 1030 aa33.61■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Ppp6r3Q922D4 844 aa33.61■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Hsp90aa1P07901 733 aaKnown RBP33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Irf9Q61179 399 aa33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Asic4Q7TNS7 539 aa33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Eif3bQ8JZQ9 803 aaKnown RBP33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Nucb1Q02819 459 aaKnown RBP33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Map3k2Q61083 619 aa33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Zpr1Q62384 459 aa33.6■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Zfp142G5E869 1843 aa33.59■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Zkscan2G3X952 960 aa33.59■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Bcar3Q9QZK2 820 aa33.59■■■□□ 2.97
Ldb1-207ENSMUST00000156585 GorabQ8BRM2 368 aa33.58■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Txnrd1Q9JMH6 613 aa33.58■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Htatsf1Q8BGC0 757 aa33.58■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Pdia6Q922R8 440 aaKnown RBP33.58■■■□□ 2.97
Ldb1-207ENSMUST00000156585 TefQ9JLC6 301 aa33.58■■■□□ 2.97
Ldb1-207ENSMUST00000156585 Tfip11Q9ERA6 838 aaKnown RBP33.57■■■□□ 2.96
Ldb1-207ENSMUST00000156585 HellsQ60848 821 aa33.57■■■□□ 2.96
Ldb1-207ENSMUST00000156585 Eif3aP23116 1344 aaKnown RBP33.57■■■□□ 2.96
Ldb1-207ENSMUST00000156585 Ppip5k2Q6ZQB6 1129 aa33.56■■■□□ 2.96
Ldb1-207ENSMUST00000156585 Terf2O35144 541 aa33.55■■■□□ 2.96
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms