RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 BcorQ8CGN4 1759 aa19.86■□□□□ 0.77
Trim39-203ENSMUST00000113706 Txnrd1Q9JMH6 613 aa19.86■□□□□ 0.77
Trim39-203ENSMUST00000113706 Fgd1P52734 960 aa19.86■□□□□ 0.77
Trim39-203ENSMUST00000113706 Tbc1d32Q3URV1 1296 aa19.86■□□□□ 0.77
Trim39-203ENSMUST00000113706 Kif18aQ91WD7 886 aa19.86■□□□□ 0.77
Trim39-203ENSMUST00000113706 Cnksr1A2A9K7 700 aa19.85■□□□□ 0.77
Trim39-203ENSMUST00000113706 LifrP42703 1092 aa19.85■□□□□ 0.77
Trim39-203ENSMUST00000113706 Mre11Q61216 706 aa19.85■□□□□ 0.77
Trim39-203ENSMUST00000113706 Map7O88735 730 aa19.84■□□□□ 0.77
Trim39-203ENSMUST00000113706 HnrnpuQ8VEK3 800 aaKnown RBP19.84■□□□□ 0.77
Trim39-203ENSMUST00000113706 Cyp2d11P24457 504 aa19.84■□□□□ 0.77
Trim39-203ENSMUST00000113706 Phkg2Q9DB30 406 aa19.84■□□□□ 0.77
Trim39-203ENSMUST00000113706 CarsQ9ER72 831 aaKnown RBP19.84■□□□□ 0.77
Trim39-203ENSMUST00000113706 CoilQ5SU73 570 aa19.83■□□□□ 0.77
Trim39-203ENSMUST00000113706 Ccdc155Q80VJ8 648 aa19.83■□□□□ 0.77
Trim39-203ENSMUST00000113706 Fam50bQ9WTJ8 334 aa19.83■□□□□ 0.77
Trim39-203ENSMUST00000113706 Fam13aQ8BGI4 693 aa19.83■□□□□ 0.77
Trim39-203ENSMUST00000113706 Fkbp4P30416 458 aa19.81■□□□□ 0.76
Trim39-203ENSMUST00000113706 Acsbg1Q99PU5 721 aa19.81■□□□□ 0.76
Trim39-203ENSMUST00000113706 Chmp7Q8R1T1 451 aa19.81■□□□□ 0.76
Trim39-203ENSMUST00000113706 Ubr2Q6WKZ8 1755 aa19.81■□□□□ 0.76
Trim39-203ENSMUST00000113706 Cetn4Q8K4K1 168 aa19.81■□□□□ 0.76
Trim39-203ENSMUST00000113706 Cog6Q8R3I3 657 aa19.8■□□□□ 0.76
Trim39-203ENSMUST00000113706 Cdhr2E9Q7P9 1308 aa19.79■□□□□ 0.76
Trim39-203ENSMUST00000113706 HdgfP51859 237 aaKnown RBP19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 ZgpatQ8VDM1 511 aa19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 Eif4g2Q62448 906 aaKnown RBP19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 4930572O03RikQ8C5Y0 211 aa19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 Cc2d1aQ8K1A6 943 aa19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 Sptbn5F6UCX4 1208 aa19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 GckrQ91X44 587 aa19.78■□□□□ 0.76
Trim39-203ENSMUST00000113706 Plekhd1B2RPU2 505 aa19.77■□□□□ 0.76
Trim39-203ENSMUST00000113706 Bcl2l13P59017 434 aa19.77■□□□□ 0.76
Trim39-203ENSMUST00000113706 Cyb5rlB1AS42 316 aa19.77■□□□□ 0.75
Trim39-203ENSMUST00000113706 Gnai2P08752 355 aaKnown RBP19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Asic4Q7TNS7 539 aa19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Aldh8a1Q8BH00 487 aa19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 FanclQ9CR14 375 aa19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 KnstrnQ9D9Z1 312 aaKnown RBP19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Tmem119Q8R138 280 aa19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Mfap1aC0HKD8 439 aaKnown RBP19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Mfap1bC0HKD9 439 aaKnown RBP19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Rabep1O35551 862 aa19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 PsapQ61207 557 aaKnown RBP19.76■□□□□ 0.75
Trim39-203ENSMUST00000113706 Marf1Q8BJ34 1730 aaKnown RBP19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Wdr63B2RY71 923 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Zpr1Q62384 459 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Slx1bQ8BX32 270 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Kif2cQ922S8 721 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Cgnl1Q6AW69 1298 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Smim5Q8BT42 78 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Echdc1Q9D9V3 322 aa19.75■□□□□ 0.75
Trim39-203ENSMUST00000113706 Tnpo1Q8BFY9 898 aaKnown RBP19.74■□□□□ 0.75
Trim39-203ENSMUST00000113706 Stk36Q69ZM6 1316 aa19.74■□□□□ 0.75
Trim39-203ENSMUST00000113706 ArxO35085 564 aa19.74■□□□□ 0.75
Trim39-203ENSMUST00000113706 Larp1Q6ZQ58 1072 aaKnown RBP19.74■□□□□ 0.75
Trim39-203ENSMUST00000113706 Taf7Q9R1C0 341 aa19.73■□□□□ 0.75
Trim39-203ENSMUST00000113706 Adcy9P51830 1353 aa19.73■□□□□ 0.75
Trim39-203ENSMUST00000113706 Ssfa2Q922B9 1252 aa19.73■□□□□ 0.75
Trim39-203ENSMUST00000113706 Speer4bQ9D9F7 267 aa19.73■□□□□ 0.75
Trim39-203ENSMUST00000113706 Ccdc146E9Q9F7 977 aa19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Smarca5Q91ZW3 1051 aaKnown RBP19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Hsp90aa1P07901 733 aaKnown RBP19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Eif3bQ8JZQ9 803 aaKnown RBP19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Gcc1Q9D4H2 778 aa19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Pdia6Q922R8 440 aaKnown RBP19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 Flt4P35917 1363 aa19.72■□□□□ 0.75
Trim39-203ENSMUST00000113706 SympkQ80X82 1284 aa19.71■□□□□ 0.75
Trim39-203ENSMUST00000113706 Exoc6bA6H5Z3 810 aa19.7■□□□□ 0.74
Trim39-203ENSMUST00000113706 Bend3Q6PAL0 825 aa19.7■□□□□ 0.74
Trim39-203ENSMUST00000113706 Srgap3Q812A2 1099 aa19.7■□□□□ 0.74
Trim39-203ENSMUST00000113706 Ppp1r42Q8R1Z4 357 aa19.7■□□□□ 0.74
Trim39-203ENSMUST00000113706 Iqsec3Q3TES0 1195 aa19.7■□□□□ 0.74
Trim39-203ENSMUST00000113706 ScaperF8VQ70 1398 aaKnown RBP19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Tjp1P39447 1745 aaKnown RBP19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm21663A0A0G2JE01 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Atg4a-psA0A0G2JFS9 396 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm7361D3Z6R1 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 5031410I06RikE9Q4E0 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm1979E9QAN3 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm5862K7N5V5 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm10220K7N660 267 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Zap70P43404 618 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Atg4aQ8C9S8 396 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Atg3Q9CPX6 314 aa19.69■□□□□ 0.74
Trim39-203ENSMUST00000113706 Pard3Q99NH2 1333 aa19.68■□□□□ 0.74
Trim39-203ENSMUST00000113706 Atp8b2P98199 1209 aa19.68■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gimap5Q8BWF2 308 aa19.68■□□□□ 0.74
Trim39-203ENSMUST00000113706 Slc5a1Q8C3K6 665 aa19.68■□□□□ 0.74
Trim39-203ENSMUST00000113706 Gm21680A0A0G2JGR8 267 aa19.67■□□□□ 0.74
Trim39-203ENSMUST00000113706 Mcm2P97310 904 aa19.67■□□□□ 0.74
Trim39-203ENSMUST00000113706 Map3k2Q61083 619 aa19.67■□□□□ 0.74
Trim39-203ENSMUST00000113706 Nphp1Q9QY53 687 aa19.67■□□□□ 0.74
Trim39-203ENSMUST00000113706 Mmp8O70138 465 aa19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 Mphosph10Q810V0 681 aaKnown RBP19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 Cwc27Q3TKY6 469 aa19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 PigbQ9JJQ0 542 aa19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 TefQ9JLC6 301 aa19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 Irf9Q61179 399 aa19.66■□□□□ 0.74
Trim39-203ENSMUST00000113706 Cnnm1Q0GA42 951 aa19.65■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms