RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 AtrnQ9WU60 1428 aa16.03■□□□□ 0.16
Trim50-202ENSMUST00000111180 MeiocA2AG06 965 aa16.02■□□□□ 0.15
Trim50-202ENSMUST00000111180 Gnai1B2RSH2 354 aa16.02■□□□□ 0.15
Trim50-202ENSMUST00000111180 Ccar1Q8CH18 1146 aaKnown RBP16.02■□□□□ 0.15
Trim50-202ENSMUST00000111180 Emilin1Q99K41 1017 aa16.02■□□□□ 0.15
Trim50-202ENSMUST00000111180 Gnai3Q9DC51 354 aa16.02■□□□□ 0.15
Trim50-202ENSMUST00000111180 Igsf1Q7TQA1 1317 aa16.01■□□□□ 0.15
Trim50-202ENSMUST00000111180 Zcwpw1Q6IR42 630 aa16.01■□□□□ 0.15
Trim50-202ENSMUST00000111180 Msl1Q6PDM1 616 aa16.01■□□□□ 0.15
Trim50-202ENSMUST00000111180 Hirip3Q8BLH7 601 aa16.01■□□□□ 0.15
Trim50-202ENSMUST00000111180 Shank3Q4ACU6 1730 aa16■□□□□ 0.15
Trim50-202ENSMUST00000111180 Ksr2Q3UVC0 959 aa16■□□□□ 0.15
Trim50-202ENSMUST00000111180 Abcc12Q80WJ6 1366 aa16■□□□□ 0.15
Trim50-202ENSMUST00000111180 Rbm25B2RY56 838 aaKnown RBP15.99■□□□□ 0.15
Trim50-202ENSMUST00000111180 Chmp7Q8R1T1 451 aa15.99■□□□□ 0.15
Trim50-202ENSMUST00000111180 Phkg2Q9DB30 406 aa15.99■□□□□ 0.15
Trim50-202ENSMUST00000111180 Hdac6Q9Z2V5 1149 aa15.99■□□□□ 0.15
Trim50-202ENSMUST00000111180 NppbP40753 121 aa15.98■□□□□ 0.15
Trim50-202ENSMUST00000111180 Asic4Q7TNS7 539 aa15.98■□□□□ 0.15
Trim50-202ENSMUST00000111180 Cdc37l1Q9CZP7 335 aa15.98■□□□□ 0.15
Trim50-202ENSMUST00000111180 Rad23bP54728 416 aa15.97■□□□□ 0.15
Trim50-202ENSMUST00000111180 Rwdd1Q9CQK7 243 aa15.97■□□□□ 0.15
Trim50-202ENSMUST00000111180 Pdzd9Q9D9M4 266 aa15.97■□□□□ 0.15
Trim50-202ENSMUST00000111180 Ccdc171E9Q1U1 1324 aa15.96■□□□□ 0.15
Trim50-202ENSMUST00000111180 Mtfr1lQ9CWE0 289 aa15.96■□□□□ 0.14
Trim50-202ENSMUST00000111180 ErfeQ6PGN1 340 aa15.95■□□□□ 0.14
Trim50-202ENSMUST00000111180 Jmjd4Q8BFT6 427 aa15.95■□□□□ 0.14
Trim50-202ENSMUST00000111180 Tns2Q8CGB6 1400 aa15.95■□□□□ 0.14
Trim50-202ENSMUST00000111180 PappaQ8R4K8 1624 aa15.95■□□□□ 0.14
Trim50-202ENSMUST00000111180 CastP51125 788 aa15.94■□□□□ 0.14
Trim50-202ENSMUST00000111180 Smarcc1P97496 1104 aa15.94■□□□□ 0.14
Trim50-202ENSMUST00000111180 Gas2l2Q5SSG4 860 aa15.94■□□□□ 0.14
Trim50-202ENSMUST00000111180 Ints5Q8CHT3 1018 aa15.94■□□□□ 0.14
Trim50-202ENSMUST00000111180 Aox2Q5SGK3 1345 aa15.94■□□□□ 0.14
Trim50-202ENSMUST00000111180 Magea6O89010 325 aa15.92■□□□□ 0.14
Trim50-202ENSMUST00000111180 Magea3Q6T340 320 aa15.92■□□□□ 0.14
Trim50-202ENSMUST00000111180 Col23a1Q8K4G2 532 aa15.92■□□□□ 0.14
Trim50-202ENSMUST00000111180 Atg3Q9CPX6 314 aa15.92■□□□□ 0.14
Trim50-202ENSMUST00000111180 Crb1Q8VHS2 1405 aa15.92■□□□□ 0.14
Trim50-202ENSMUST00000111180 Gm13023A2A8N2 498 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Ppef1O35655 650 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Miga2Q8BK03 593 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Sumf1Q8R0F3 372 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Ssfa2Q922B9 1252 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Kcnn1Q9EQR3 537 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Usp21Q9QZL6 566 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Calr4Q3TQS0 420 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Dcaf5Q80T85 946 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 Usp16Q99LG0 825 aa15.91■□□□□ 0.14
Trim50-202ENSMUST00000111180 CoblQ5NBX1 1337 aaKnown RBP15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 Rnf180Q3U827 592 aa15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 Smg7Q5RJH6 1138 aaKnown RBP15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 U2surpQ6NV83 1029 aaKnown RBP15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 Polr3glQ8R0C0 218 aa15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 Ubr2Q6WKZ8 1755 aa15.9■□□□□ 0.14
Trim50-202ENSMUST00000111180 Ccdc155Q80VJ8 648 aa15.89■□□□□ 0.13
Trim50-202ENSMUST00000111180 Cap2Q9CYT6 476 aa15.89■□□□□ 0.13
Trim50-202ENSMUST00000111180 Mbd3Q9Z2D8 285 aaKnown RBP15.89■□□□□ 0.13
Trim50-202ENSMUST00000111180 Znrd1-asQ8R0E5 213 aa15.88■□□□□ 0.13
Trim50-202ENSMUST00000111180 NeflP08551 543 aa15.87■□□□□ 0.13
Trim50-202ENSMUST00000111180 Prom2Q3UUY6 835 aa15.87■□□□□ 0.13
Trim50-202ENSMUST00000111180 Ggnbp2Q5SV77 696 aa15.87■□□□□ 0.13
Trim50-202ENSMUST00000111180 Ccdc60Q8C4J0 545 aa15.87■□□□□ 0.13
Trim50-202ENSMUST00000111180 Snap23O09044 210 aa15.86■□□□□ 0.13
Trim50-202ENSMUST00000111180 Cavin2Q63918 418 aaKnown RBP15.85■□□□□ 0.13
Trim50-202ENSMUST00000111180 Trim26Q99PN3 545 aa15.85■□□□□ 0.13
Trim50-202ENSMUST00000111180 Lrp5Q91VN0 1614 aa15.85■□□□□ 0.13
Trim50-202ENSMUST00000111180 G3bp1P97855 465 aaKnown RBP15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Gpr162Q3UN16 588 aa15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Klhdc4Q921I2 584 aa15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 RtcbQ99LF4 505 aaKnown RBP15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Mrps5Q99N87 432 aaKnown RBP15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Vamp4O70480 141 aa15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Prim1P20664 417 aa15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Trim58Q5NCC9 485 aa15.84■□□□□ 0.13
Trim50-202ENSMUST00000111180 Zswim8Q3UHH1 1832 aaKnown RBP15.83■□□□□ 0.13
Trim50-202ENSMUST00000111180 Dlg5E9Q9R9 1921 aa15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 Gm6268A2A3U9 297 aa15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 Yy1Q00899 414 aa15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 Sgip1Q8VD37 806 aa15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 Foxp4Q9DBY0 795 aaKnown RBP15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 Tjp1P39447 1745 aaKnown RBP15.83■□□□□ 0.12
Trim50-202ENSMUST00000111180 KarsQ99MN1 595 aaKnown RBP15.82■□□□□ 0.12
Trim50-202ENSMUST00000111180 Msh6P54276 1358 aaKnown RBP15.81■□□□□ 0.12
Trim50-202ENSMUST00000111180 Btbd11Q6GQW0 1109 aa15.81■□□□□ 0.12
Trim50-202ENSMUST00000111180 Apbb1Q9QXJ1 710 aa15.81■□□□□ 0.12
Trim50-202ENSMUST00000111180 Nkx2-3P97334 362 aa15.8■□□□□ 0.12
Trim50-202ENSMUST00000111180 CpzQ8R4V4 654 aa15.8■□□□□ 0.12
Trim50-202ENSMUST00000111180 Col1a2Q01149 1372 aa15.8■□□□□ 0.12
Trim50-202ENSMUST00000111180 Plekhm2Q80TQ5 1018 aa15.79■□□□□ 0.12
Trim50-202ENSMUST00000111180 Efcab2Q9CQ46 164 aa15.79■□□□□ 0.12
Trim50-202ENSMUST00000111180 Rnaseh2aQ9CWY8 301 aa15.79■□□□□ 0.12
Trim50-202ENSMUST00000111180 BcorQ8CGN4 1759 aa15.79■□□□□ 0.12
Trim50-202ENSMUST00000111180 1700019A02RikA0A087WPV9 146 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 AampJ3QN89 436 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Q3TQI7 289 aaKnown RBP15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Pibf1E9Q6K3 756 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Atf5O70191 283 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Tlr8P58682 1032 aa15.78■□□□□ 0.12
Trim50-202ENSMUST00000111180 Pde4dQ01063 747 aa15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms