RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 HomezQ80W88 542 aa9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Camta1A2A891 1682 aa9.21□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Clcn1Q64347 994 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Casc1Q6TDU8 730 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Nol11Q8BJW5 723 aaKnown RBP9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Cc2d1aQ8K1A6 943 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Pik3c2aQ61194 1686 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Als2Q920R0 1651 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ttc21aQ8C0S4 1314 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Terf2O35144 541 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Hs1bp3Q3TC93 395 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Zfp91Q62511 572 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ltbp4Q8K4G1 1666 aa9.2□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Gse1Q3U3C9 1213 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Q3UPC7 1272 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Pdcl2Q78Y63 240 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Glipr1l2Q9CQ35 332 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Il4rP16382 810 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Phlpp2Q8BXA7 1320 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Fkbp4P30416 458 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 CrklP47941 303 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 HnrnpuQ8VEK3 800 aaKnown RBP9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Thsd7aQ69ZU6 1645 aa9.19□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ano8Q6PB70 1060 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Cnksr2Q80YA9 1032 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Catsper2A2ARP9 588 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Nkx2-3P97334 362 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 RgmbQ7TQ33 436 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ric3Q8BPM6 367 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Fam43aQ8BUP8 424 aa9.18□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Duxf3A0A0N4SV92 674 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Kif3aP28741 701 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Gsdma3Q5Y4Y6 464 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 SkilQ60665 675 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 TkfcQ8VC30 578 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Speer4bQ9D9F7 267 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Fam83gQ5SWY7 812 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Cgnl1Q6AW69 1298 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Cetn4Q8K4K1 168 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Col16a1Q8BLX7 1580 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Chpf2Q3UU43 768 aa9.17□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Kif1aP33173 1695 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 HdgfP51859 237 aaKnown RBP9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 1700010I14RikQ7TPG0 532 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Rlbp1Q9Z275 317 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ubap1lG3UW59 384 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Phlpp1Q8CHE4 1687 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 TnrQ8BYI9 1358 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Gm21680A0A0G2JGR8 267 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Gm973E9Q295 1059 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Arhgef1Q61210 920 aaKnown RBP9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Ppp1r37Q8BKR5 712 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Kif18aQ91WD7 886 aa9.16□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Qtrt2B8ZXI1 415 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Zpr1Q62384 459 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Map2P20357 1828 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Nsd3Q6P2L6 1439 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Card10P58660 1021 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 ThemisQ8BGW0 636 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Eno4Q8C042 619 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Chmp7Q8R1T1 451 aa9.15□□□□□ -0.94
Bdnf-203ENSMUST00000111043 Lmtk3Q5XJV6 1424 aa9.15□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Btbd11Q6GQW0 1109 aa9.15□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Larp1Q6ZQ58 1072 aaKnown RBP9.15□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Cyp2d12Q8BVD2 504 aa9.15□□□□□ -0.95
Bdnf-203ENSMUST00000111043 ScaperF8VQ70 1398 aaKnown RBP9.15□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Sv2bQ8BG39 683 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Ccdc173A0JLY1 547 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Ccdc171E9Q1U1 1324 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Triml2E9PW10 424 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Cog6Q8R3I3 657 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gripap1Q8VD04 806 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Chrna2Q91X60 512 aa9.14□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Hspa1lP16627 641 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Kif4P33174 1231 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Antxr1Q9CZ52 562 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Amotl1Q9D4H4 968 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Ubr1O70481 1757 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Mon2Q80TL7 1715 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Col15a1O35206 1367 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gm21663A0A0G2JE01 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gm7361D3Z6R1 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 5031410I06RikE9Q4E0 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gm1979E9QAN3 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gm5862K7N5V5 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Gm10220K7N660 267 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Tom1O88746 492 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 NcapgE9PWG6 1004 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 MccE9PWI3 1003 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Zkscan1Q8BGS3 561 aaKnown RBP9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Uhrf1bp1B2KF50 1429 aa9.13□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Psrc1Q9D0P7 329 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 ImpactO55091 318 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Trim30aP15533 496 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Nom1Q3UFM5 854 aaKnown RBP9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Aldh1l1Q8R0Y6 902 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Pdzd9Q9D9M4 266 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Map3k13Q1HKZ5 959 aa9.12□□□□□ -0.95
Bdnf-203ENSMUST00000111043 Fam135bQ9DAI6 1403 aa9.11□□□□□ -0.95
Bdnf-203ENSMUST00000111043 AU019823E9PUQ3 292 aa9.11□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms