RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Ggnbp2Q5SV77 696 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Pcf11G3X9Z4 1553 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Nf2P46662 596 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Mnat1P51949 309 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 TxlnaQ6PAM1 554 aaKnown RBP9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ddx27Q921N6 760 aaKnown RBP9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ccdc88cQ6VGS5 2009 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Washc4Q3UMB9 1173 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Cdkl5Q3UTQ8 938 aa9.37□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Nkx1-2P42580 305 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Prkar2bP31324 416 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Clcn1Q64347 994 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ccdc12Q8R344 166 aaKnown RBP9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Erlin1Q91X78 346 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Gys2Q8VCB3 704 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Chrna2Q91X60 512 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Zswim4Q8C7B8 1101 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Fbf1A2A870 1173 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 HdgfP51859 237 aaKnown RBP9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ankrd24Q80VM7 985 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Tmx4Q8C0L0 335 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Rhot2Q8JZN7 620 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ccdc112A0AUP1 442 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 IqcgQ80W32 419 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Arhgap5P97393 1501 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Rbm33Q9CXK9 1231 aaKnown RBP9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Bcar3Q9QZK2 820 aa9.36□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Tyro3P55144 880 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Cfap157Q0VFX2 523 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Rassf4Q8CB96 322 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Exoc6bA6H5Z3 810 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Aldh1l1Q8R0Y6 902 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ppp1r42Q8R1Z4 357 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Strn4P58404 760 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Pde4cQ3UEI1 686 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 EappQ5BU09 281 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Zfp251Q6PCX8 632 aa9.35□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Phldb1Q6PDH0 1371 aaKnown RBP9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Map3k7clP58500 142 aa9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Hs1bp3Q3TC93 395 aa9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Gsdma3Q5Y4Y6 464 aa9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 U2af2P26369 475 aaKnown RBP9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Ppfia3P60469 1194 aa9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Gm21680A0A0G2JGR8 267 aa9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Cct2P80314 535 aaKnown RBP9.34□□□□□ -0.91
Scn8a-204ENSMUST00000108909 Rnf34Q99KR6 376 aa9.34□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Trim11Q99PQ2 467 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Sh3bp1P55194 680 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cyp26c1B2RXA7 518 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 EprsQ8CGC7 1512 aaKnown RBP9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Tmx3Q8BXZ1 456 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Armc9Q9D2I5 817 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Duxf3A0A0N4SV92 674 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Mindy4Q3UQI9 744 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 HypkQ9CR41 129 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Hip1rQ9JKY5 1068 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Lmbr1Q9JIT0 490 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 LrpprcQ6PB66 1392 aaKnown RBP9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gdpd2Q9ESM6 539 aa9.33□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Naip5Q9R016 1403 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Kiaa1211Q5PR69 1207 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cep120Q7TSG1 988 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Acbd3Q8BMP6 525 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ankrd1Q9CR42 319 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Fyb1O35601 819 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Lekr1B2RVN1 116 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Smc1aQ9CU62 1233 aaKnown RBP9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Oas2E9Q9A9 742 aa9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Bms1Q6PGF5 1284 aaKnown RBP9.32□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Tex13c2A0A0G2JGA3 530 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Krt84Q99M73 603 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Plekhm2Q80TQ5 1018 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Map3k1P53349 1493 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Myh11O08638 1972 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Wdr63B2RY71 923 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Pank2Q3U4S0 443 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Fchsd2Q3USJ8 740 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ankrd40Q5SUE8 363 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ggt6Q6PDE7 497 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Brd1E9PZ26 1189 aaKnown RBP9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ppfibp2O35711 882 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Iqgap2Q3UQ44 1575 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ano10Q8BH79 659 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Syt1P46096 421 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ttll12Q3UDE2 639 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ehmt1Q5DW34 1296 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Larp1bA0A0A6YXJ7 370 aaKnown RBP9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 GmnnO88513 206 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Iffo1Q8BXL9 562 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Slc26a8Q8R0C3 999 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 UvssaQ9D479 717 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Zkscan5Q9Z1D8 819 aa9.31□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Zfpm1O35615 995 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ercc6lQ8BHK9 1240 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Cc2d1bQ8BRN9 848 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Q9D9H8 365 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Zscan29E9Q5B4 869 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Ppfibp1Q8C8U0 969 aaKnown RBP9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Zbtb21E9Q444 1094 aa9.3□□□□□ -0.92
Scn8a-204ENSMUST00000108909 Gadd45bP22339 160 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 74.5 ms