RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Eif3bQ8JZQ9 803 aaKnown RBP17.23■□□□□ 0.35
Cln3-203ENSMUST00000098036 PappaQ8R4K8 1624 aa17.22■□□□□ 0.35
Cln3-203ENSMUST00000098036 Tspyl2Q7TQI8 677 aa17.22■□□□□ 0.35
Cln3-203ENSMUST00000098036 Chmp4bQ9D8B3 224 aaKnown RBP17.22■□□□□ 0.35
Cln3-203ENSMUST00000098036 Pnpla7A2AJ88 1352 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Msh6P54276 1358 aaKnown RBP17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm21663A0A0G2JE01 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm7361D3Z6R1 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 5031410I06RikE9Q4E0 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm1979E9QAN3 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm5862K7N5V5 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm10220K7N660 267 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Tmco5bQ80X59 307 aa17.21■□□□□ 0.35
Cln3-203ENSMUST00000098036 Gm38655A0A286YDK6 273 aa17.19■□□□□ 0.34
Cln3-203ENSMUST00000098036 Atf5O70191 283 aa17.19■□□□□ 0.34
Cln3-203ENSMUST00000098036 ApobrQ8VBT6 942 aa17.19■□□□□ 0.34
Cln3-203ENSMUST00000098036 Phkg2Q9DB30 406 aa17.19■□□□□ 0.34
Cln3-203ENSMUST00000098036 Abca3Q8R420 1704 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Arhgap33Q80YF9 1305 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 1700019A02RikA0A087WPV9 146 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 CenpbP27790 599 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Q3TQI7 289 aaKnown RBP17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Maco1Q7TQE6 664 aaKnown RBP17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Slc5a1Q8C3K6 665 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Chmp7Q8R1T1 451 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Pdzd9Q9D9M4 266 aa17.18■□□□□ 0.34
Cln3-203ENSMUST00000098036 Duxf3A0A0N4SV92 674 aa17.17■□□□□ 0.34
Cln3-203ENSMUST00000098036 Afg3l2Q8JZQ2 802 aaKnown RBP17.17■□□□□ 0.34
Cln3-203ENSMUST00000098036 Nectin2P32507 530 aa17.16■□□□□ 0.34
Cln3-203ENSMUST00000098036 Vars2Q3U2A8 1060 aa17.16■□□□□ 0.34
Cln3-203ENSMUST00000098036 Ccnl1Q52KE7 532 aaKnown RBP17.16■□□□□ 0.34
Cln3-203ENSMUST00000098036 Asic4Q7TNS7 539 aa17.16■□□□□ 0.34
Cln3-203ENSMUST00000098036 Ssfa2Q922B9 1252 aa17.16■□□□□ 0.34
Cln3-203ENSMUST00000098036 Shank3Q4ACU6 1730 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Supt16hQ920B9 1047 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Senp3Q9EP97 568 aaKnown RBP17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 MvpQ9EQK5 861 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Dlg5E9Q9R9 1921 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Pibf1E9Q6K3 756 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Btbd11Q6GQW0 1109 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Ppp1r3fQ9JIG4 799 aa17.15■□□□□ 0.34
Cln3-203ENSMUST00000098036 Eif4a1P60843 406 aaKnown RBP17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Apba2P98084 750 aa17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Ric3Q8BPM6 367 aa17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Smc5Q8CG46 1101 aaKnown RBP17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Col1a2Q01149 1372 aa17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Tjp1P39447 1745 aaKnown RBP17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Ubr2Q6WKZ8 1755 aa17.14■□□□□ 0.33
Cln3-203ENSMUST00000098036 Snapc4Q8BP86 1333 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Ankrd44B2RXR6 993 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Hs1bp3Q3TC93 395 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Sv2bQ8BG39 683 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Q8BT18 775 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 OscarQ8VBT3 265 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Znf330Q922H9 316 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Rps6ka4Q9Z2B9 773 aa17.13■□□□□ 0.33
Cln3-203ENSMUST00000098036 Cnksr1A2A9K7 700 aa17.12■□□□□ 0.33
Cln3-203ENSMUST00000098036 Chpf2Q3UU43 768 aa17.12■□□□□ 0.33
Cln3-203ENSMUST00000098036 Crb1Q8VHS2 1405 aa17.12■□□□□ 0.33
Cln3-203ENSMUST00000098036 Nolc1E9Q5C9 702 aaKnown RBP17.11■□□□□ 0.33
Cln3-203ENSMUST00000098036 Aldh1l2Q8K009 923 aa17.11■□□□□ 0.33
Cln3-203ENSMUST00000098036 Klc3Q91W40 508 aa17.11■□□□□ 0.33
Cln3-203ENSMUST00000098036 BcorQ8CGN4 1759 aa17.11■□□□□ 0.33
Cln3-203ENSMUST00000098036 Sos2Q02384 1333 aa17.11■□□□□ 0.33
Cln3-203ENSMUST00000098036 Rangap1P46061 589 aaKnown RBP17.1■□□□□ 0.33
Cln3-203ENSMUST00000098036 PsapQ61207 557 aaKnown RBP17.1■□□□□ 0.33
Cln3-203ENSMUST00000098036 Pim2Q62070 370 aa17.1■□□□□ 0.33
Cln3-203ENSMUST00000098036 Cyp2d12Q8BVD2 504 aa17.1■□□□□ 0.33
Cln3-203ENSMUST00000098036 Slc4a3P16283 1227 aa17.09■□□□□ 0.33
Cln3-203ENSMUST00000098036 Ints5Q8CHT3 1018 aa17.09■□□□□ 0.33
Cln3-203ENSMUST00000098036 Nkx2-3P97334 362 aa17.08■□□□□ 0.32
Cln3-203ENSMUST00000098036 Ccdc155Q80VJ8 648 aa17.08■□□□□ 0.32
Cln3-203ENSMUST00000098036 Tmem119Q8R138 280 aa17.08■□□□□ 0.32
Cln3-203ENSMUST00000098036 Nutm1Q8BHP2 1126 aa17.07■□□□□ 0.32
Cln3-203ENSMUST00000098036 Kiaa0319lQ8K135 1048 aa17.07■□□□□ 0.32
Cln3-203ENSMUST00000098036 Atl3Q91YH5 541 aa17.07■□□□□ 0.32
Cln3-203ENSMUST00000098036 Chmp5Q9D7S9 219 aa17.07■□□□□ 0.32
Cln3-203ENSMUST00000098036 Rlbp1Q9Z275 317 aa17.07■□□□□ 0.32
Cln3-203ENSMUST00000098036 Ildr2B5TVM2 661 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 Morc2aQ69ZX6 1030 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 Ankrd13dQ6PD24 605 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 EspnQ9ET47 871 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 Hdac6Q9Z2V5 1149 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 VirmaA2AIV2 1811 aaKnown RBP17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 CoilQ5SU73 570 aa17.06■□□□□ 0.32
Cln3-203ENSMUST00000098036 Phf23Q8BSN5 401 aa17.05■□□□□ 0.32
Cln3-203ENSMUST00000098036 Taf7Q9R1C0 341 aa17.05■□□□□ 0.32
Cln3-203ENSMUST00000098036 Aifm3Q3TY86 605 aa17.04■□□□□ 0.32
Cln3-203ENSMUST00000098036 Fam83gQ5SWY7 812 aa17.04■□□□□ 0.32
Cln3-203ENSMUST00000098036 GckrQ91X44 587 aa17.04■□□□□ 0.32
Cln3-203ENSMUST00000098036 Iqsec3Q3TES0 1195 aa17.02■□□□□ 0.32
Cln3-203ENSMUST00000098036 Ezh2Q61188 746 aaKnown RBP17.02■□□□□ 0.32
Cln3-203ENSMUST00000098036 Tnnt1O88346 262 aa17.02■□□□□ 0.31
Cln3-203ENSMUST00000098036 Cypt1Q8CH20 168 aa17.02■□□□□ 0.31
Cln3-203ENSMUST00000098036 Atg3Q9CPX6 314 aa17.02■□□□□ 0.31
Cln3-203ENSMUST00000098036 Echdc1Q9D9V3 322 aa17.02■□□□□ 0.31
Cln3-203ENSMUST00000098036 Disp3A3KFU9 1347 aa17.01■□□□□ 0.31
Cln3-203ENSMUST00000098036 Bicdl1A0JNT9 577 aa17.01■□□□□ 0.31
Cln3-203ENSMUST00000098036 Wwc1Q5SXA9 1104 aa17.01■□□□□ 0.31
Cln3-203ENSMUST00000098036 Jmjd4Q8BFT6 427 aa17.01■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms