RNA–Protein interactions for RNA: ENSMUST00000078752.9

Casc4-201, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 4,215 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-201ENSMUST00000078752 F2rP30558 430 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Arhgap5P97393 1501 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Odf2A3KGV1 830 aaKnown RBP17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ccdc93Q7TQK5 629 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ccdc73Q8CDM4 1066 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Polr1aO35134 1717 aaKnown RBP17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Il16O54824 1322 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Pabpn1Q8CCS6 302 aaKnown RBP17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Nat10Q8K224 1024 aaKnown RBP17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Cyp27a1Q9DBG1 533 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 CenphQ9QYM8 241 aa17.6■□□□□ 0.41
Casc4-201ENSMUST00000078752 Nf2P46662 596 aa17.59■□□□□ 0.41
Casc4-201ENSMUST00000078752 Pdia3P27773 505 aaKnown RBP17.59■□□□□ 0.41
Casc4-201ENSMUST00000078752 Tmx4Q8C0L0 335 aa17.59■□□□□ 0.41
Casc4-201ENSMUST00000078752 Nrbp1Q99J45 535 aa17.59■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ap3b2Q9JME5 1082 aa17.59■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ccdc57Q6PHN1 1016 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 TxlnbQ8VBT1 685 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Nsd2Q8BVE8 1365 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gnai1B2RSH2 354 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gsto1O09131 240 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Ptpdc1Q6NZK8 747 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Odf2lQ9D478 642 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Gnai3Q9DC51 354 aa17.58■□□□□ 0.41
Casc4-201ENSMUST00000078752 Bcl2l13P59017 434 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Rtel1Q0VGM9 1203 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Plekhm2Q80TQ5 1018 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Rab11fip3Q8CHD8 1047 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ppp2r3dQ9Z176 491 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Zscan29E9Q5B4 869 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Trak2Q6P9N8 913 aa17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ddx41Q91VN6 622 aaKnown RBP17.58■□□□□ 0.4
Casc4-201ENSMUST00000078752 AU022751B1B0V2 589 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Hdgfl1Q2VPR5 283 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Cep63Q3UPP8 700 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Tbc1d31Q6NXY1 996 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ccdc186Q8C9S4 917 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 SarnpQ9D1J3 210 aaKnown RBP17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Cplx1P63040 134 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ddx49Q4FZF3 480 aaKnown RBP17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Zfp51Q3U4L8 781 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Rnf20Q5DTM8 973 aa17.57■□□□□ 0.4
Casc4-201ENSMUST00000078752 Mnat1P51949 309 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Gdap1l1Q8VE33 370 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Stk38Q91VJ4 465 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Slx4ipQ9D7Y9 413 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ndufa8Q9DCJ5 172 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Nphp1Q9QY53 687 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Myo1cQ9WTI7 1063 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Rfx7F8VPJ6 1459 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Aldh1l1Q8R0Y6 902 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ddx11Q6AXC6 880 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 SelenooQ9DBC0 667 aa17.56■□□□□ 0.4
Casc4-201ENSMUST00000078752 Pprc1Q6NZN1 1644 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Dnai2A2AC93 623 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Bbof1Q3V079 533 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Nol11Q8BJW5 723 aaKnown RBP17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Pwp2Q8BU03 919 aaKnown RBP17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ccdc12Q8R344 166 aaKnown RBP17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ccdc39Q9D5Y1 937 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Prdm16A2A935 1275 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Fam163aQ8CAA5 168 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Irx5Q9JKQ4 484 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Cdk13Q69ZA1 1511 aaKnown RBP17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Arhgap4B1AUY3 965 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ercc3P49135 783 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Zbtb38Q3LR78 1197 aa17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Eif4g1Q6NZJ6 1600 aaKnown RBP17.55■□□□□ 0.4
Casc4-201ENSMUST00000078752 Lcmt1A0A0U1RNF2 332 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Kif3cO35066 796 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Srgap3Q812A2 1099 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Smc1aQ9CU62 1233 aaKnown RBP17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Nucb1Q02819 459 aaKnown RBP17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Cwc27Q3TKY6 469 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Atp1a2Q6PIE5 1020 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Mx2Q9WVP9 655 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Gas2l3Q3UWW6 683 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ice2Q3UZ18 988 aaKnown RBP17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Atp1a4Q9WV27 1032 aa17.54■□□□□ 0.4
Casc4-201ENSMUST00000078752 Smarcc2Q6PDG5 1213 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Adck5Q80V03 582 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Tceanc2Q8R2M0 207 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Atp6v1aP50516 617 aaKnown RBP17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Samsn1P57725 372 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Afap1Q80YS6 731 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Sycp1Q62209 993 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Zranb1Q7M760 708 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ano10Q8BH79 659 aa17.53■□□□□ 0.4
Casc4-201ENSMUST00000078752 MpripP97434 1024 aa17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Zkscan4Q5SZT6 480 aa17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Smc2Q8CG48 1191 aaKnown RBP17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Eif3aP23116 1344 aaKnown RBP17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Ddx19aQ61655 478 aaKnown RBP17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Morc2aQ69ZX6 1030 aa17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 LlphQ9D945 130 aaKnown RBP17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Thoc2B1AZI6 1594 aaKnown RBP17.52■□□□□ 0.4
Casc4-201ENSMUST00000078752 Slc7a3P70423 618 aa17.52■□□□□ 0.39
Casc4-201ENSMUST00000078752 Map4k4P97820 1233 aaKnown RBP17.52■□□□□ 0.39
Casc4-201ENSMUST00000078752 Gtpbp6Q3U6U5 514 aa17.52■□□□□ 0.39
Casc4-201ENSMUST00000078752 Igbp1bQ9QZ29 343 aa17.52■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms