RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 EzrP26040 586 aaKnown RBP14.07□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Nucb2P81117 420 aa14.07□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Q3UJC8 639 aa14.07□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Slc20a2Q80UP8 656 aa14.07□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Stk11ipQ3TAA7 1072 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Ecm2Q5FW85 670 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Pcdhgc5Q91XW9 944 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Atp2b2Q9R0K7 1198 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Cep170bQ80U49 1574 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Gm973E9Q295 1059 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Gprasp1Q5U4C1 1347 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Ano8Q6PB70 1060 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Maco1Q7TQE6 664 aaKnown RBP14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Cps1Q8C196 1500 aa14.06□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Kcnf1Q7TSH7 493 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Nek4Q9Z1J2 792 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Zfp597E9Q6S0 419 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Cetn4Q8K4K1 168 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Card6E9PWH2 1175 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Gm10563F6WIE4 79 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Trap1aP19473 224 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Lrriq3Q14DL3 633 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Brinp3Q499E0 766 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Atf3Q60765 181 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Fbxo41Q6NS60 873 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Igsf3Q6ZQA6 1194 aa14.05□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Col18a1P39061 1774 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Ift172Q6VH22 1749 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Oas2E9Q9A9 742 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Wwc1Q5SXA9 1104 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Gdpd2Q9ESM6 539 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Taf3Q5HZG4 932 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 GsdmaQ9EST1 446 aa14.04□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Fam184aE9PW83 1143 aa14.03□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Rangap1P46061 589 aaKnown RBP14.03□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Ccdc34Q3UI66 367 aa14.03□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Plekhg1F6S200 1446 aa14.03□□□□□ -0.16
Vamp1-201ENSMUST00000032487 LifrP42703 1092 aa14.02□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Morc2aQ69ZX6 1030 aa14.02□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Tbc1d8Q9Z1A9 1134 aa14.02□□□□□ -0.16
Vamp1-201ENSMUST00000032487 P2rx7Q9Z1M0 595 aa14.02□□□□□ -0.16
Vamp1-201ENSMUST00000032487 IbtkQ6ZPR6 1352 aaKnown RBP14.02□□□□□ -0.16
Vamp1-201ENSMUST00000032487 Kif2aP28740 705 aa14.02□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Zfp397Q7TNK4 527 aa14.02□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Itsn2Q9Z0R6 1659 aa14.02□□□□□ -0.17
Vamp1-201ENSMUST00000032487 GscQ02591 256 aa14.01□□□□□ -0.17
Vamp1-201ENSMUST00000032487 CenpqQ9CPQ5 267 aa14.01□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Oxsr1Q6P9R2 527 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Znf330Q922H9 316 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Kif24Q6NWW5 1356 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Col14a1Q80X19 1797 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Sipa1l1Q8C0T5 1782 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Lcmt1A0A0U1RNF2 332 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Cyp27a1Q9DBG1 533 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Ccdc146E9Q9F7 977 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Tpd52l1O54818 204 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Apaf1O88879 1249 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Fam177a1Q8BR63 207 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Irx6Q9ER75 438 aa14□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Ppip5k2Q6ZQB6 1129 aa13.99□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Rreb1Q3UH06 1700 aaKnown RBP13.99□□□□□ -0.17
Vamp1-201ENSMUST00000032487 MycnP03966 462 aaKnown RBP13.99□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Gimap5Q8BWF2 308 aa13.99□□□□□ -0.17
Vamp1-201ENSMUST00000032487 CenpjQ569L8 1344 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 CastP51125 788 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Kiaa1211Q5PR69 1207 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 OptnQ8K3K8 584 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Unc13bQ9Z1N9 1602 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Arglu1Q3UL36 271 aaKnown RBP13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 CenppQ9CZ92 286 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Mmel1Q9JLI3 765 aa13.98□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Kif20bQ80WE4 1774 aaKnown RBP13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Speer4f2E9Q366 295 aa13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Tom1O88746 492 aa13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 CebpzP53569 1052 aaKnown RBP13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 DnmbpQ6TXD4 1580 aa13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Cdk19Q8BWD8 501 aa13.97□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Gm45015A0A140LII9 184 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Gm18336A0A140LIU8 765 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Ttc21aQ8C0S4 1314 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Nwd1A6H603 1563 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Nlrp3Q8R4B8 1033 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 Gm11983V9GXS8 105 aa13.96□□□□□ -0.17
Vamp1-201ENSMUST00000032487 NalcnQ8BXR5 1738 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Zscan29E9Q5B4 869 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Serpinb6bO08804 377 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Tpm3P21107 285 aaKnown RBP13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 RdxP26043 583 aaKnown RBP13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Syt10Q9R0N4 523 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Usp32F8VPZ3 1604 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Zfp51Q3U4L8 781 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Spata32Q8C5V0 334 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Vps33aQ9D2N9 598 aa13.95□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Znf771Q8BJ90 317 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 C3P01027 1663 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Abca14E9Q8F8 1683 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Ccdc60Q8C4J0 545 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 MvpQ9EQK5 861 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Pik3c2bE9QAN8 1632 aa13.94□□□□□ -0.18
Vamp1-201ENSMUST00000032487 Elp1Q7TT37 1333 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms