RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Rad54l2Q99NG0 1466 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Hdgfl1Q2VPR5 283 aa11.81□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Vps18Q8R307 973 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Stard3nlQ9DCI3 235 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Gas2l3Q3UWW6 683 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Jade2Q6ZQF7 829 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Brd3Q8K2F0 726 aaKnown RBP11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Serpina10Q8R121 448 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 PogzQ8BZH4 1409 aaKnown RBP11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Gm1979E9QAN3 267 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 GmnnO88513 206 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Rbm27Q5SFM8 1060 aaKnown RBP11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Brf1Q8CFK2 676 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Smco2Q9DA21 347 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Acbd3Q8BMP6 525 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fsd2Q8BZ52 692 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 ClasrpQ8CFC7 668 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Brd1E9PZ26 1189 aaKnown RBP11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Nol8Q3UHX0 1147 aaKnown RBP11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Mum1Q6DID5 682 aa11.8□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ppp1r15aP17564 657 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fam13aQ8BGI4 693 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 TefQ9JLC6 301 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Prl7d1P04769 244 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ms4a1P19437 291 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ccdc158Q8CDI6 1109 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Pik3r4Q8VD65 1358 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ccdc66Q6NS45 935 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 DonsonQ9QXP4 560 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fam114a1Q9D281 569 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 TatQ8QZR1 454 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fam76aQ922G2 307 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Atxn3Q9CVD2 355 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Gzf1Q4VBD9 706 aa11.79□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Zscan20B2KFW1 1030 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ppp1r42Q8R1Z4 357 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Cfap53Q9D439 514 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 CebpzP53569 1052 aaKnown RBP11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Aldh8a1Q8BH00 487 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Lrrc45Q8CIM1 670 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Ppp4r3bQ922R5 820 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Naa15Q80UM3 865 aaKnown RBP11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Rassf4Q8CB96 322 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Il4rP16382 810 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Gng11P61953 73 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 MpripP97434 1024 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Mindy4Q3UQI9 744 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Kdm4cQ8VCD7 1054 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Srgap1Q91Z69 1062 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Bloc1s2Q9CWG9 143 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Hmg20bQ9Z104 317 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Iqca1Q9CUL5 857 aa11.78□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fyb1O35601 819 aa11.77□□□□□ -0.52
Ubr1-201ENSMUST00000028728 Fam135bQ9DAI6 1403 aa11.77□□□□□ -0.52
Ubr1-201ENSMUST00000028728 NexmifQ5DTT1 1515 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Kdm2bQ6P1G2 1309 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Zeb2Q9R0G7 1215 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 CadpsQ80TJ1 1355 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ehmt1Q5DW34 1296 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Atf7Q8R0S1 413 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Q9D9H8 365 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Gsdma2Q32M21 443 aa11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Secisbp2lQ6A098 1086 aaKnown RBP11.77□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Map3k5O35099 1380 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Anp32cQ64G17 123 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Zfp397Q7TNK4 527 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Bloc1s4Q8VED2 215 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Snx13Q6PHS6 957 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Als2cr12Q8BVM7 383 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Smarca5Q91ZW3 1051 aaKnown RBP11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 LyarQ08288 388 aaKnown RBP11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Calcoco1Q8CGU1 691 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Fam135aQ6NS59 1506 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 TmpoQ61033 693 aaKnown RBP11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Commd10Q8JZY2 202 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Mug1P28665 1476 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Smtnl1Q99LM3 459 aa11.76□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ncapg2Q6DFV1 1138 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Nom1Q3UFM5 854 aaKnown RBP11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ccdc114Q3UX62 658 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ccdc12Q8R344 166 aaKnown RBP11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Q8BT18 775 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Cdk19Q8BWD8 501 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Zkscan5Q9Z1D8 819 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ccdc141E9Q8Q6 1531 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Cavin2Q63918 418 aaKnown RBP11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Mcm6P97311 821 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Tacc1Q6Y685 774 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ankib1Q6ZPS6 1085 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Mipol1Q9D9F8 279 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Zbtb22Q9Z0G7 638 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ppip5k1A2ARP1 1436 aa11.75□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Nf2P46662 596 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 AidaQ8C4Q6 305 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Map2k1P31938 393 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Ccdc112A0AUP1 442 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Fkbp4P30416 458 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Smc1aQ9CU62 1233 aaKnown RBP11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 Nphp3Q7TNH6 1325 aa11.74□□□□□ -0.53
Ubr1-201ENSMUST00000028728 TbcaP48428 108 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms