RNA–Protein interactions for RNA: ENSMUST00000026434.12

Chmp6-201, Transcript of Charged multivesicular body protein 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chmp6, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6-201ENSMUST00000026434 Echdc1Q9D9V3 322 aa22.59■■□□□ 1.21
Chmp6-201ENSMUST00000026434 Col1a2Q01149 1372 aa22.59■■□□□ 1.21
Chmp6-201ENSMUST00000026434 Triml2E9PW10 424 aa22.59■■□□□ 1.21
Chmp6-201ENSMUST00000026434 Fam83gQ5SWY7 812 aa22.59■■□□□ 1.21
Chmp6-201ENSMUST00000026434 Cog6Q8R3I3 657 aa22.58■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Gm10471E9Q1C7 252 aa22.57■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Cyp2d12Q8BVD2 504 aa22.56■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Atp10bB1AWN4 1474 aa22.56■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Disp3A3KFU9 1347 aa22.56■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Anapc15-psA0A140T8L6 141 aa22.55■■□□□ 1.2
Chmp6-201ENSMUST00000026434 4930572O03RikQ8C5Y0 211 aa22.55■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Eif2s2Q99L45 331 aaKnown RBP22.55■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Ltbp4Q8K4G1 1666 aa22.54■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Slit1Q80TR4 1531 aa22.54■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Sptbn5F6UCX4 1208 aa22.54■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Atp8b2P98199 1209 aa22.54■■□□□ 1.2
Chmp6-201ENSMUST00000026434 CenppQ9CZ92 286 aa22.54■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Taf7Q9R1C0 341 aa22.53■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Pnmal2G3X9N3 661 aa22.52■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Chmp7Q8R1T1 451 aa22.52■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Ssfa2Q922B9 1252 aa22.52■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Scn4aQ9ER60 1841 aa22.52■■□□□ 1.2
Chmp6-201ENSMUST00000026434 Pdzd9Q9D9M4 266 aa22.51■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Phkg2Q9DB30 406 aa22.51■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Brinp3Q499E0 766 aa22.5■■□□□ 1.19
Chmp6-201ENSMUST00000026434 BcorQ8CGN4 1759 aa22.5■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Nphp1Q9QY53 687 aa22.5■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Mfap1aC0HKD8 439 aaKnown RBP22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Mfap1bC0HKD9 439 aaKnown RBP22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Aplp1Q03157 653 aa22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Pip4k2bQ80XI4 416 aa22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Amigo3Q8C2S7 508 aa22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 FanclQ9CR14 375 aa22.49■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Tns2Q8CGB6 1400 aa22.48■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Dlg5E9Q9R9 1921 aa22.48■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Zranb3Q6NZP1 1069 aa22.48■■□□□ 1.19
Chmp6-201ENSMUST00000026434 GckrQ91X44 587 aa22.48■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Slx1bQ8BX32 270 aa22.47■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Eif3bQ8JZQ9 803 aaKnown RBP22.47■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Cyp46a1Q9WVK8 500 aa22.46■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Eif3aP23116 1344 aaKnown RBP22.46■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Ppp1r42Q8R1Z4 357 aa22.46■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Abca15E9PWH4 1668 aa22.45■■□□□ 1.19
Chmp6-201ENSMUST00000026434 Gm10093D3YYI8 482 aa22.45■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Hdac1O09106 482 aaKnown RBP22.45■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Mmp8O70138 465 aa22.45■■□□□ 1.18
Chmp6-201ENSMUST00000026434 HellsQ60848 821 aa22.45■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Mcmdc2E9Q956 681 aa22.44■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Tnnt1O88346 262 aa22.44■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Mum1Q6DID5 682 aa22.44■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Srgap3Q812A2 1099 aa22.44■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Atg4a-psA0A0G2JFS9 396 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Iqsec3Q3TES0 1195 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Tbc1d9Q3UYK3 1264 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Zpr1Q62384 459 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Bend3Q6PAL0 825 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Atg4aQ8C9S8 396 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 FocadA2AKG8 1798 aa22.43■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Ccdc146E9Q9F7 977 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 RgmbQ7TQ33 436 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Tnpo1Q8BFY9 898 aaKnown RBP22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Cc2d1aQ8K1A6 943 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Nek4Q9Z1J2 792 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Cyp2d11P24457 504 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Fkbp4P30416 458 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Ddx17Q501J6 650 aaKnown RBP22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Htatsf1Q8BGC0 757 aa22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Noc3lQ8VI84 807 aaKnown RBP22.42■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Tnks1bp1P58871 1720 aa22.41■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Zkscan2G3X952 960 aa22.41■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Arhgef1Q61210 920 aaKnown RBP22.41■■□□□ 1.18
Chmp6-201ENSMUST00000026434 TefQ9JLC6 301 aa22.41■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Irf9Q61179 399 aa22.39■■□□□ 1.18
Chmp6-201ENSMUST00000026434 SympkQ80X82 1284 aa22.39■■□□□ 1.18
Chmp6-201ENSMUST00000026434 Flt4P35917 1363 aa22.38■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Cers3Q1A3B0 383 aa22.38■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Nkx2-3P97334 362 aa22.38■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Cwc27Q3TKY6 469 aa22.38■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Ccdc9Q8VC31 543 aaKnown RBP22.37■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Tceal9Q9DD24 104 aa22.37■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Cct4P80315 539 aaKnown RBP22.36■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Kif2cQ922S8 721 aa22.36■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Rnf123Q5XPI3 1314 aa22.36■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Adcy9P51830 1353 aa22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Cfdp1O88271 295 aaKnown RBP22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Ier5O89113 308 aa22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Nucb1Q02819 459 aaKnown RBP22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Asic4Q7TNS7 539 aa22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Cdhr2E9Q7P9 1308 aa22.35■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Pdia3P27773 505 aaKnown RBP22.34■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Pde3bQ61409 1100 aa22.34■■□□□ 1.17
Chmp6-201ENSMUST00000026434 1700010I14RikQ7TPG0 532 aa22.34■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Ccdc155Q80VJ8 648 aa22.34■■□□□ 1.17
Chmp6-201ENSMUST00000026434 DiexfQ8BTT6 772 aaKnown RBP22.34■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Ppip5k2Q6ZQB6 1129 aa22.33■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Smarca5Q91ZW3 1051 aaKnown RBP22.33■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Elp1Q7TT37 1333 aaKnown RBP22.33■■□□□ 1.17
Chmp6-201ENSMUST00000026434 Map3k2Q61083 619 aa22.33■■□□□ 1.16
Chmp6-201ENSMUST00000026434 Mphosph10Q810V0 681 aaKnown RBP22.33■■□□□ 1.16
Chmp6-201ENSMUST00000026434 Kdm4cQ8VCD7 1054 aa22.33■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms