RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Tmem87bQ8BKU8 555 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Lamb3Q61087 1168 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Erlin2Q8BFZ9 340 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Cfap69Q8BH53 942 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 ApobrQ8VBT6 942 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 GpkowQ56A08 488 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Ccne1Q61457 408 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Trim11Q99PQ2 467 aa14.41□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Larp1Q6ZQ58 1072 aaKnown RBP14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Cep55Q8BT07 462 aa14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Cpa2Q504N0 417 aa14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Limch1Q3UH68 1057 aa14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Nol11Q8BJW5 723 aaKnown RBP14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Lrrc45Q8CIM1 670 aa14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 NgdnQ9DB96 315 aaKnown RBP14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Dnajc2P54103 621 aaKnown RBP14.4□□□□□ -0.1
Ldb3-201ENSMUST00000022327 Iqca1Q9CUL5 857 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Rcan3Q9JKK0 239 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Hvcn1Q3U2S8 269 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Irf9Q61179 399 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Cavin2Q63918 418 aaKnown RBP14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Bcar3Q9QZK2 820 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Kdm5bQ80Y84 1544 aa14.39□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Cep89Q9CZX2 791 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Pde4bB1AWC9 736 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Gnl2Q99LH1 728 aaKnown RBP14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 LlphQ9D945 130 aaKnown RBP14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Znf287Q9EQB9 759 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Cers3Q1A3B0 383 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Slc13a4Q8BZ82 625 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Bag4Q8CI61 457 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Echdc1Q9D9V3 322 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Igbp1bQ9QZ29 343 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 TimelessQ9R1X4 1197 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Fam50bQ9WTJ8 334 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Hmg20bQ9Z104 317 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Mybbp1aQ7TPV4 1344 aaKnown RBP14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Elp1Q7TT37 1333 aaKnown RBP14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Def6Q8C2K1 630 aa14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Cpsf1Q9EPU4 1441 aaKnown RBP14.38□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Map9Q3TRR0 646 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Spag5Q7TME2 1165 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Brms1Q99N20 246 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Hmgb2P30681 210 aaKnown RBP14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Nap1l2P51860 460 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Pafah1b1P63005 410 aaKnown RBP14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Slc5a1Q8C3K6 665 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 EvcP57680 1005 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ell2Q3UKU1 639 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ccdc150Q8CDI7 1110 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 MicalclQ9D5U9 680 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 LifrP42703 1092 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 ItpripQ3TNL8 555 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Atf7Q8R0S1 413 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Kdm2bQ6P1G2 1309 aa14.37□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Slc7a3P70423 618 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Pdcl2Q78Y63 240 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Chpf2Q3UU43 768 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Gas2l3Q3UWW6 683 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Gnat3Q3V3I2 354 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ccdc172Q810N9 267 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Stx6Q9JKK1 255 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 IbspQ61711 324 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ankrd1Q9CR42 319 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Stxbp4Q9WV89 557 aa14.36□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Duxf3A0A0N4SV92 674 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 NapbP28663 298 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Abcf1Q6P542 837 aaKnown RBP14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Rnf41Q8BH75 317 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Tmem67Q8BR76 992 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ankle2Q6P1H6 964 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Pde4dQ01063 747 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Soga3Q6NZL0 945 aa14.35□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ube2hP62257 183 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 4931400O07RikQ9D4M5 137 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Nap1l5Q9JJF0 156 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Zmym3Q9JLM4 1370 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Rasa1E9PYG6 1038 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ift57Q8BXG3 429 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ccdc178Q8CDV0 866 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 IkQ9Z1M8 557 aaKnown RBP14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Jmjd4Q8BFT6 427 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Kdm3aQ6PCM1 1323 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Ppfia1B2RXQ2 1266 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Bms1Q6PGF5 1284 aaKnown RBP14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Wdr7Q920I9 1489 aa14.34□□□□□ -0.11
Ldb3-201ENSMUST00000022327 Zkscan7E9PVW1 718 aa14.33□□□□□ -0.11
Ldb3-201ENSMUST00000022327 LyarQ08288 388 aaKnown RBP14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Mrps27Q8BK72 415 aaKnown RBP14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Polr3dQ91WD1 398 aa14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 CenphQ9QYM8 241 aa14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Tmc2Q8R4P4 888 aa14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Gm10093D3YYI8 482 aa14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Hdac1O09106 482 aaKnown RBP14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Aldh8a1Q8BH00 487 aa14.33□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Trim27Q62158 513 aa14.32□□□□□ -0.12
Ldb3-201ENSMUST00000022327 CenppQ9CZ92 286 aa14.32□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Map3k2Q61083 619 aa14.32□□□□□ -0.12
Ldb3-201ENSMUST00000022327 TnnQ80Z71 1560 aa14.32□□□□□ -0.12
Ldb3-201ENSMUST00000022327 Mcm3P25206 812 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms