RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Inpp5bQ8K337 993 aa14.71□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ap3b2Q9JME5 1082 aa14.71□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Sipa1l2Q80TE4 1722 aa14.7□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Fam184aE9PW83 1143 aa14.7□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Vwa3bJ9JI28 736 aa14.7□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Gys2Q8VCB3 704 aa14.7□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ybx3Q9JKB3 361 aaKnown RBP14.7□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Plekhg1F6S200 1446 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Syce3B5KM66 88 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Tmco5bQ80X59 307 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Znf526Q8BI66 675 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 E4f1Q8CCE9 783 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Farp2Q91VS8 1065 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 D430041D05RikF6ZGR6 1678 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ccdc146E9Q9F7 977 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Kcna6Q61923 529 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Kiaa0753Q6A000 959 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ggt6Q6PDE7 497 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Rab11fip3Q8CHD8 1047 aa14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Dhx30Q99PU8 1217 aaKnown RBP14.69□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Atp2b2Q9R0K7 1198 aa14.68□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Hoxa7P02830 229 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Nectin2P32507 530 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Fnbp4Q6ZQ03 1031 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Slc12a5Q91V14 1138 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Exosc9Q9JHI7 438 aaKnown RBP14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Zfp142G5E869 1843 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Spef2Q8C9J3 1734 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Atp6v1dP57746 247 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Sox12Q04890 314 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Ncbp1Q3UYV9 790 aaKnown RBP14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Chrna2Q91X60 512 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Bcl2l12Q9D3J3 255 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Cntnap1O54991 1385 aa14.67□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Slit2Q9R1B9 1521 aa14.66□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Erc2Q6PH08 957 aa14.66□□□□□ -0.06
Ufd1-201ENSMUST00000005394 DccP70211 1447 aa14.66□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Rtf1A2AQ19 715 aaKnown RBP14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Idi1P58044 227 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 FanclQ9CR14 375 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 LlphQ9D945 130 aaKnown RBP14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Frmpd2A0A140LI67 1392 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Klhl34A2AI76 644 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Zkscan16A2ALW2 728 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Vsig10D3YX43 558 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Bach2P97303 839 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Fam13aQ8BGI4 693 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 Phf23Q8BSN5 401 aa14.65□□□□□ -0.06
Ufd1-201ENSMUST00000005394 C5P06684 1680 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 EzrP26040 586 aaKnown RBP14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 MsnP26041 577 aaKnown RBP14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Anapc15P60007 132 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Hvcn1Q3U2S8 269 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 NexnQ7TPW1 607 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Fbxo2Q80UW2 297 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 AnlnQ8K298 1121 aaKnown RBP14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 MypopQ8R4U1 393 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 SrrtQ99MR6 875 aaKnown RBP14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 PalmQ9Z0P4 383 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Nhsl1Q8CAF4 1587 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Ppp1r15aP17564 657 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Gdpd2Q9ESM6 539 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Irx4Q9QY61 515 aa14.64□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Wnk3Q80XP9 1757 aa14.63□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Als2Q920R0 1651 aa14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Gadd45bP22339 160 aa14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Nol8Q3UHX0 1147 aaKnown RBP14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 PtprvP70289 1705 aa14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Abca14E9Q8F8 1683 aa14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Tmem2Q5FWI3 1383 aa14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Rbm27Q5SFM8 1060 aaKnown RBP14.62□□□□□ -0.07
Ufd1-201ENSMUST00000005394 NktrP30415 1453 aa14.61□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Gsto1O09131 240 aa14.61□□□□□ -0.07
Ufd1-201ENSMUST00000005394 St18Q80TY4 1045 aa14.61□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Ric3Q8BPM6 367 aa14.61□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Chd1lQ9CXF7 900 aa14.61□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Smarce1O54941 411 aaKnown RBP14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Zfp251Q6PCX8 632 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Nol11Q8BJW5 723 aaKnown RBP14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Ptgs1P22437 602 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Ddx19aQ61655 478 aaKnown RBP14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Dmrt2Q8BG36 561 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Smim5Q8BT42 78 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Ccdc7Q9D541 371 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Cyp46a1Q9WVK8 500 aa14.6□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Vgll3P85442 326 aa14.59□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Rnf214Q8BFU3 668 aaKnown RBP14.59□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Olfml1Q8BSH2 233 aa14.59□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Atg4a-psA0A0G2JFS9 396 aa14.58□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Tpm3P21107 285 aaKnown RBP14.58□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Atg4aQ8C9S8 396 aa14.58□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Mx2Q9WVP9 655 aa14.58□□□□□ -0.07
Ufd1-201ENSMUST00000005394 Adgrb1Q3UHD1 1582 aa14.58□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Lrp6O88572 1613 aa14.58□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Strn4P58404 760 aa14.58□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Filip1lQ6P6L0 1131 aa14.58□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Noc3lQ8VI84 807 aaKnown RBP14.58□□□□□ -0.08
Ufd1-201ENSMUST00000005394 MccE9PWI3 1003 aa14.57□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Zkscan2G3X952 960 aa14.57□□□□□ -0.08
Ufd1-201ENSMUST00000005394 Chl1P70232 1209 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 171.4 ms