Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SH3TC1Q8TE82 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC23.4■■□□□ 1.34
SH3TC1Q8TE82 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SH3TC1Q8TE82 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
SH3TC1Q8TE82 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 MIR3652-201ENST00000579335 131 ntBASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
SH3TC1Q8TE82 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.39■■□□□ 1.33
SH3TC1Q8TE82 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
SH3TC1Q8TE82 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 PRR29-207ENST00000580752 458 ntTSL 3 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 AL691432.3-201ENST00000621860 400 ntBASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SH3TC1Q8TE82 TPM4P1-201ENST00000436100 807 ntBASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 AC141586.3-201ENST00000562166 1838 ntBASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SH3TC1Q8TE82 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 AC026396.1-201ENST00000419388 421 ntBASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 AP002414.4-201ENST00000589764 1148 ntBASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 FP475955.4-201ENST00000623131 1990 ntBASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SH3TC1Q8TE82 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CHCHD2P8-201ENST00000429873 447 ntBASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 PRELID1P1-202ENST00000567272 903 ntBASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 RNF126P1-202ENST00000569893 925 ntBASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SH3TC1Q8TE82 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms