Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SNORD60-201ENST00000383903 83 ntBASIC-2.23□□□□□ -2.77
TNFP01375 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.23□□□□□ -2.77
TNFP01375 RNU6-483P-201ENST00000384088 108 ntBASIC-2.23□□□□□ -2.77
TNFP01375 RNU6-578P-201ENST00000390980 103 ntBASIC-2.23□□□□□ -2.77
TNFP01375 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.23□□□□□ -2.77
TNFP01375 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.23□□□□□ -2.77
TNFP01375 NBR2-204ENST00000587322 63 ntBASIC-2.23□□□□□ -2.77
TNFP01375 AC103810.7-201ENST00000607821 91 ntBASIC-2.23□□□□□ -2.77
TNFP01375 Z69908.1-201ENST00000622603 247 ntBASIC-2.23□□□□□ -2.77
TNFP01375 RNU5F-1-201ENST00000362507 117 ntBASIC-2.24□□□□□ -2.77
TNFP01375 Y_RNA.339-201ENST00000365325 102 ntBASIC-2.24□□□□□ -2.77
TNFP01375 MIR548D2-201ENST00000384955 97 ntBASIC-2.24□□□□□ -2.77
TNFP01375 SNORA40.4-201ENST00000390971 128 ntBASIC-2.24□□□□□ -2.77
TNFP01375 SNORD77.2-201ENST00000391045 68 ntBASIC-2.24□□□□□ -2.77
TNFP01375 RNU6-172P-201ENST00000411000 93 ntBASIC-2.24□□□□□ -2.77
TNFP01375 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.24□□□□□ -2.77
TNFP01375 RNU6-1161P-201ENST00000516176 102 ntBASIC-2.24□□□□□ -2.77
TNFP01375 MIR3163-201ENST00000581592 73 ntBASIC-2.24□□□□□ -2.77
TNFP01375 MIR6863-201ENST00000636112 90 ntBASIC-2.24□□□□□ -2.77
TNFP01375 RNU6-409P-201ENST00000384114 104 ntBASIC-2.25□□□□□ -2.77
TNFP01375 RNU6-644P-201ENST00000391155 98 ntBASIC-2.25□□□□□ -2.77
TNFP01375 MIR548F5-201ENST00000408421 86 ntBASIC-2.25□□□□□ -2.77
TNFP01375 Y_RNA.602-201ENST00000410535 92 ntBASIC-2.25□□□□□ -2.77
TNFP01375 MIR3149-201ENST00000584629 83 ntBASIC-2.25□□□□□ -2.77
TNFP01375 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.25□□□□□ -2.77
TNFP01375 RNU6-768P-201ENST00000384683 107 ntBASIC-2.26□□□□□ -2.77
TNFP01375 RNU6-121P-201ENST00000410525 99 ntBASIC-2.26□□□□□ -2.77
TNFP01375 AL121914.1-201ENST00000450188 156 ntBASIC-2.26□□□□□ -2.77
TNFP01375 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.26□□□□□ -2.77
TNFP01375 RNU7-153P-201ENST00000516455 62 ntBASIC-2.26□□□□□ -2.77
TNFP01375 AC009094.1-201ENST00000564443 426 ntBASIC-2.26□□□□□ -2.77
TNFP01375 MIR429-201ENST00000362106 83 ntBASIC-2.27□□□□□ -2.77
TNFP01375 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.27□□□□□ -2.77
TNFP01375 RNU6-665P-201ENST00000384639 107 ntBASIC-2.27□□□□□ -2.77
TNFP01375 RNU4-14P-201ENST00000410858 122 ntBASIC-2.27□□□□□ -2.77
TNFP01375 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.27□□□□□ -2.77
TNFP01375 MIR4272-201ENST00000635924 64 ntBASIC-2.27□□□□□ -2.77
TNFP01375 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.28□□□□□ -2.77
TNFP01375 SNORD81.2-201ENST00000365153 76 ntBASIC-2.28□□□□□ -2.77
TNFP01375 SNORD116-1-201ENST00000384335 95 ntBASIC-2.28□□□□□ -2.77
TNFP01375 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.28□□□□□ -2.77
TNFP01375 RNU6-519P-201ENST00000410590 108 ntBASIC-2.28□□□□□ -2.77
TNFP01375 SNORD2.1-201ENST00000458762 69 ntBASIC-2.28□□□□□ -2.77
TNFP01375 RN7SKP298-201ENST00000515950 94 ntBASIC-2.28□□□□□ -2.77
TNFP01375 Z99129.1-201ENST00000612510 255 ntBASIC-2.28□□□□□ -2.77
TNFP01375 MIR379-201ENST00000362218 67 ntBASIC-2.29□□□□□ -2.78
TNFP01375 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.29□□□□□ -2.78
TNFP01375 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.29□□□□□ -2.78
TNFP01375 MIR559-201ENST00000385188 96 ntBASIC-2.29□□□□□ -2.78
TNFP01375 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.29□□□□□ -2.78
TNFP01375 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.29□□□□□ -2.78
TNFP01375 MIR4796-201ENST00000580742 81 ntBASIC-2.29□□□□□ -2.78
TNFP01375 AC025253.1-201ENST00000613623 543 ntBASIC-2.29□□□□□ -2.78
TNFP01375 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.3□□□□□ -2.78
TNFP01375 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.3□□□□□ -2.78
TNFP01375 SNORD115-46-201ENST00000390982 71 ntBASIC-2.3□□□□□ -2.78
TNFP01375 SNORD11.1-201ENST00000459482 85 ntBASIC-2.3□□□□□ -2.78
TNFP01375 RNU6-345P-201ENST00000517001 107 ntBASIC-2.3□□□□□ -2.78
TNFP01375 MIR4777-201ENST00000583710 86 ntBASIC-2.3□□□□□ -2.78
TNFP01375 AC080013.6-201ENST00000606185 215 ntBASIC-2.3□□□□□ -2.78
TNFP01375 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.3□□□□□ -2.78
TNFP01375 AC002553.4-201ENST00000616896 331 ntBASIC-2.3□□□□□ -2.78
TNFP01375 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.31□□□□□ -2.78
TNFP01375 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.31□□□□□ -2.78
TNFP01375 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.31□□□□□ -2.78
TNFP01375 Y_RNA.668-201ENST00000516233 93 ntBASIC-2.31□□□□□ -2.78
TNFP01375 AC090971.5-201ENST00000621102 293 ntBASIC-2.31□□□□□ -2.78
TNFP01375 AL160413.1-201ENST00000622780 310 ntBASIC-2.31□□□□□ -2.78
TNFP01375 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.32□□□□□ -2.78
TNFP01375 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.32□□□□□ -2.78
TNFP01375 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.32□□□□□ -2.78
TNFP01375 RNU6-604P-201ENST00000390917 100 ntBASIC-2.32□□□□□ -2.78
TNFP01375 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.32□□□□□ -2.78
TNFP01375 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.32□□□□□ -2.78
TNFP01375 RNU6-264P-201ENST00000517134 104 ntBASIC-2.32□□□□□ -2.78
TNFP01375 MIR4744-201ENST00000581563 82 ntBASIC-2.32□□□□□ -2.78
TNFP01375 SNORD58B-201ENST00000607313 66 ntBASIC-2.32□□□□□ -2.78
TNFP01375 RNU4-90P-201ENST00000362773 141 ntBASIC-2.34□□□□□ -2.78
TNFP01375 RNU6-590P-201ENST00000365039 107 ntBASIC-2.34□□□□□ -2.78
TNFP01375 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.34□□□□□ -2.78
TNFP01375 RNU6-890P-201ENST00000384121 107 ntBASIC-2.34□□□□□ -2.78
TNFP01375 RNU6-813P-201ENST00000384691 107 ntBASIC-2.34□□□□□ -2.78
TNFP01375 RNU6-554P-201ENST00000410466 106 ntBASIC-2.34□□□□□ -2.78
TNFP01375 AC099799.1-201ENST00000439809 192 ntBASIC-2.34□□□□□ -2.78
TNFP01375 AC090574.1-201ENST00000623186 233 ntBASIC-2.34□□□□□ -2.78
TNFP01375 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.35□□□□□ -2.79
TNFP01375 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.35□□□□□ -2.79
TNFP01375 RNU6-290P-201ENST00000365212 101 ntBASIC-2.35□□□□□ -2.79
TNFP01375 RNU6-742P-201ENST00000365289 107 ntBASIC-2.35□□□□□ -2.79
TNFP01375 RNU6-326P-201ENST00000365480 107 ntBASIC-2.35□□□□□ -2.79
TNFP01375 RNU5A-2P-201ENST00000384337 116 ntBASIC-2.35□□□□□ -2.79
TNFP01375 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.35□□□□□ -2.79
TNFP01375 U8.20-201ENST00000459445 131 ntBASIC-2.35□□□□□ -2.79
TNFP01375 AL050303.3-201ENST00000613704 284 ntBASIC-2.35□□□□□ -2.79
TNFP01375 MIR4426-201ENST00000640330 63 ntBASIC-2.35□□□□□ -2.79
TNFP01375 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.36□□□□□ -2.79
TNFP01375 RNU6-818P-201ENST00000364837 108 ntBASIC-2.36□□□□□ -2.79
TNFP01375 SNORD116-6-201ENST00000384711 96 ntBASIC-2.36□□□□□ -2.79
TNFP01375 RNY4P18-201ENST00000391107 89 ntBASIC-2.36□□□□□ -2.79
TNFP01375 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-2.36□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 257.5 ms