Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZNF519P2-201ENST00000557032 169 ntBASIC-2.37□□□□□ -2.79
APOBP04114 SNORD81.1-201ENST00000363064 77 ntBASIC-2.37□□□□□ -2.79
APOBP04114 CCDC34P1-201ENST00000507441 517 ntBASIC-2.37□□□□□ -2.79
APOBP04114 RNA5SP401-201ENST00000515920 127 ntBASIC-2.37□□□□□ -2.79
APOBP04114 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.37□□□□□ -2.79
APOBP04114 SNORA75-201ENST00000384158 137 ntBASIC-2.37□□□□□ -2.79
APOBP04114 MIR656-201ENST00000385224 78 ntBASIC-2.37□□□□□ -2.79
APOBP04114 RNU4-90P-201ENST00000362773 141 ntBASIC-2.38□□□□□ -2.79
APOBP04114 RNU6-162P-201ENST00000516228 103 ntBASIC-2.38□□□□□ -2.79
APOBP04114 RNU6-267P-201ENST00000516714 103 ntBASIC-2.38□□□□□ -2.79
APOBP04114 RNU6-264P-201ENST00000517134 104 ntBASIC-2.38□□□□□ -2.79
APOBP04114 Y_RNA.166-201ENST00000363730 102 ntBASIC-2.38□□□□□ -2.79
APOBP04114 MIR3163-201ENST00000581592 73 ntBASIC-2.38□□□□□ -2.79
APOBP04114 DLEU2_3.2-201ENST00000612883 73 ntBASIC-2.38□□□□□ -2.79
APOBP04114 Y_RNA.606-201ENST00000410579 103 ntBASIC-2.38□□□□□ -2.79
APOBP04114 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.38□□□□□ -2.79
APOBP04114 Y_RNA.260-201ENST00000364628 101 ntBASIC-2.39□□□□□ -2.79
APOBP04114 Y_RNA.530-201ENST00000384587 101 ntBASIC-2.39□□□□□ -2.79
APOBP04114 MTND2P39-201ENST00000457230 764 ntBASIC-2.39□□□□□ -2.79
APOBP04114 RNA5SP224-201ENST00000365069 126 ntBASIC-2.39□□□□□ -2.79
APOBP04114 AC073114.1-201ENST00000612027 490 ntBASIC-2.39□□□□□ -2.79
APOBP04114 MIR548AH-201ENST00000637109 76 ntBASIC-2.39□□□□□ -2.79
APOBP04114 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.39□□□□□ -2.79
APOBP04114 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.39□□□□□ -2.79
APOBP04114 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.39□□□□□ -2.79
APOBP04114 RNA5SP236-201ENST00000516169 116 ntBASIC-2.39□□□□□ -2.79
APOBP04114 MT-TW-201ENST00000387382 68 ntBASIC-2.39□□□□□ -2.79
APOBP04114 RNU6-453P-201ENST00000516819 85 ntBASIC-2.39□□□□□ -2.79
APOBP04114 AL137067.1-201ENST00000615933 120 ntBASIC-2.39□□□□□ -2.79
APOBP04114 RNU6-1252P-201ENST00000363054 104 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU4-85P-201ENST00000364675 123 ntBASIC-2.4□□□□□ -2.79
APOBP04114 Y_RNA.382-201ENST00000365672 114 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-788P-201ENST00000390967 104 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.4□□□□□ -2.79
APOBP04114 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-755P-201ENST00000364400 103 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-120P-201ENST00000516077 103 ntBASIC-2.4□□□□□ -2.79
APOBP04114 MIR3144-201ENST00000579460 79 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.4□□□□□ -2.79
APOBP04114 RNU6-195P-201ENST00000411352 109 ntBASIC-2.4□□□□□ -2.79
APOBP04114 Y_RNA.64-201ENST00000362845 102 ntBASIC-2.41□□□□□ -2.79
APOBP04114 AC090971.5-201ENST00000621102 293 ntBASIC-2.41□□□□□ -2.79
APOBP04114 RNU6-593P-201ENST00000364716 112 ntBASIC-2.41□□□□□ -2.8
APOBP04114 Y_RNA.473-201ENST00000384333 102 ntBASIC-2.41□□□□□ -2.8
APOBP04114 SNORA18.5-201ENST00000516616 101 ntBASIC-2.41□□□□□ -2.8
APOBP04114 MIR7978-201ENST00000636158 59 ntBASIC-2.41□□□□□ -2.8
APOBP04114 MIR3662-201ENST00000637030 95 ntBASIC-2.41□□□□□ -2.8
APOBP04114 Y_RNA.560-201ENST00000384689 102 ntBASIC-2.41□□□□□ -2.8
APOBP04114 MIR628-201ENST00000385229 95 ntBASIC-2.41□□□□□ -2.8
APOBP04114 RNU6-211P-201ENST00000384047 107 ntBASIC-2.42□□□□□ -2.8
APOBP04114 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-2.42□□□□□ -2.8
APOBP04114 AC107308.1-201ENST00000615897 301 ntBASIC-2.42□□□□□ -2.8
APOBP04114 SNORA40.3-201ENST00000390964 122 ntBASIC-2.42□□□□□ -2.8
APOBP04114 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.42□□□□□ -2.8
APOBP04114 RNU6-363P-201ENST00000362895 105 ntBASIC-2.42□□□□□ -2.8
APOBP04114 RNU6-151P-201ENST00000364158 107 ntBASIC-2.42□□□□□ -2.8
APOBP04114 RNU6-261P-201ENST00000459506 102 ntBASIC-2.42□□□□□ -2.8
APOBP04114 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.43□□□□□ -2.8
APOBP04114 RNU6-1059P-201ENST00000363752 98 ntBASIC-2.43□□□□□ -2.8
APOBP04114 RNU6-307P-201ENST00000516743 106 ntBASIC-2.43□□□□□ -2.8
APOBP04114 RNU6-500P-201ENST00000362349 107 ntBASIC-2.43□□□□□ -2.8
APOBP04114 MT-TT-201ENST00000387460 66 ntBASIC-2.43□□□□□ -2.8
APOBP04114 U6atac.1-201ENST00000616025 117 ntBASIC-2.43□□□□□ -2.8
APOBP04114 RNU6-1272P-201ENST00000362776 107 ntBASIC-2.43□□□□□ -2.8
APOBP04114 MIR7110-201ENST00000612638 86 ntBASIC-2.43□□□□□ -2.8
APOBP04114 RNU6-409P-201ENST00000384114 104 ntBASIC-2.44□□□□□ -2.8
APOBP04114 AL121914.1-201ENST00000450188 156 ntBASIC-2.44□□□□□ -2.8
APOBP04114 U8.20-201ENST00000459445 131 ntBASIC-2.44□□□□□ -2.8
APOBP04114 Y_RNA.206-201ENST00000364136 102 ntBASIC-2.44□□□□□ -2.8
APOBP04114 MTND1P19-201ENST00000511780 315 ntBASIC-2.44□□□□□ -2.8
APOBP04114 AL117187.1-201ENST00000555482 181 ntBASIC-2.44□□□□□ -2.8
APOBP04114 RNU6-1158P-201ENST00000391167 107 ntBASIC-2.45□□□□□ -2.8
APOBP04114 RNU6-99P-201ENST00000364721 107 ntBASIC-2.45□□□□□ -2.8
APOBP04114 SNORD116.1-201ENST00000365628 92 ntBASIC-2.45□□□□□ -2.8
APOBP04114 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.45□□□□□ -2.8
APOBP04114 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.45□□□□□ -2.8
APOBP04114 RNU6-256P-201ENST00000516747 97 ntBASIC-2.45□□□□□ -2.8
APOBP04114 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.45□□□□□ -2.8
APOBP04114 SNORA41B-201ENST00000384785 128 ntBASIC-2.45□□□□□ -2.8
APOBP04114 MIR630-201ENST00000384957 97 ntBASIC-2.45□□□□□ -2.8
APOBP04114 MIR616-201ENST00000385293 97 ntBASIC-2.45□□□□□ -2.8
APOBP04114 MT-TH-201ENST00000387441 69 ntBASIC-2.46□□□□□ -2.8
APOBP04114 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.46□□□□□ -2.8
APOBP04114 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.46□□□□□ -2.8
APOBP04114 AL450471.1-201ENST00000447509 127 ntBASIC-2.46□□□□□ -2.8
APOBP04114 RNU6-507P-201ENST00000516045 100 ntBASIC-2.46□□□□□ -2.8
APOBP04114 MIR6128-201ENST00000615528 109 ntBASIC-2.46□□□□□ -2.8
APOBP04114 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.46□□□□□ -2.8
APOBP04114 RNU6-662P-201ENST00000384253 104 ntBASIC-2.46□□□□□ -2.8
APOBP04114 RNU6-644P-201ENST00000391155 98 ntBASIC-2.46□□□□□ -2.8
APOBP04114 Y_RNA.605-201ENST00000410577 105 ntBASIC-2.46□□□□□ -2.8
APOBP04114 Z99129.1-201ENST00000612510 255 ntBASIC-2.46□□□□□ -2.8
APOBP04114 MIR4317-201ENST00000637586 65 ntBASIC-2.46□□□□□ -2.8
APOBP04114 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.47□□□□□ -2.8
APOBP04114 RNU6-172P-201ENST00000411000 93 ntBASIC-2.47□□□□□ -2.8
APOBP04114 RNU6-818P-201ENST00000364837 108 ntBASIC-2.47□□□□□ -2.8
APOBP04114 RNU6-1148P-201ENST00000410992 104 ntBASIC-2.47□□□□□ -2.8
APOBP04114 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.47□□□□□ -2.8
APOBP04114 MIR1321-201ENST00000637766 79 ntBASIC-2.47□□□□□ -2.8
APOBP04114 RNA5SP215-201ENST00000363440 122 ntBASIC-2.47□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms