Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 RNU6-1110P-201ENST00000516462 101 ntBASIC1.6□□□□□ -2.15
GPC1P35052 U6.59-201ENST00000615686 107 ntBASIC1.6□□□□□ -2.15
GPC1P35052 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
GPC1P35052 SNORD18A-201ENST00000363753 72 ntBASIC1.59□□□□□ -2.15
GPC1P35052 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.59□□□□□ -2.15
GPC1P35052 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
GPC1P35052 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
GPC1P35052 AC079150.2-201ENST00000443733 78 ntBASIC1.58□□□□□ -2.16
GPC1P35052 RNU5B-6P-201ENST00000516765 68 ntBASIC1.58□□□□□ -2.16
GPC1P35052 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
GPC1P35052 MIR8081-201ENST00000611533 95 ntBASIC1.58□□□□□ -2.16
GPC1P35052 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
GPC1P35052 RNA5SP192-201ENST00000364404 120 ntBASIC1.57□□□□□ -2.16
GPC1P35052 RNU6-726P-201ENST00000364680 107 ntBASIC1.57□□□□□ -2.16
GPC1P35052 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
GPC1P35052 RNA5SP299-201ENST00000391203 116 ntBASIC1.57□□□□□ -2.16
GPC1P35052 FABP5P4-201ENST00000437203 171 ntBASIC1.57□□□□□ -2.16
GPC1P35052 MIR3678-201ENST00000578455 94 ntBASIC1.57□□□□□ -2.16
GPC1P35052 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
GPC1P35052 SNORA25.5-201ENST00000363782 126 ntBASIC1.56□□□□□ -2.16
GPC1P35052 RNU1-141P-201ENST00000364623 158 ntBASIC1.56□□□□□ -2.16
GPC1P35052 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
GPC1P35052 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
GPC1P35052 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
GPC1P35052 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
GPC1P35052 MIR548C-201ENST00000384815 97 ntBASIC1.55□□□□□ -2.16
GPC1P35052 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
GPC1P35052 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
GPC1P35052 RNA5SP47-201ENST00000517230 109 ntBASIC1.55□□□□□ -2.16
GPC1P35052 MIR548V-201ENST00000584165 80 ntBASIC1.55□□□□□ -2.16
GPC1P35052 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
GPC1P35052 RNU6-269P-201ENST00000391077 97 ntBASIC1.54□□□□□ -2.16
GPC1P35052 RNU6-141P-201ENST00000410499 105 ntBASIC1.54□□□□□ -2.16
GPC1P35052 snoU13.13-201ENST00000458842 104 ntBASIC1.54□□□□□ -2.16
GPC1P35052 RNA5SP458-201ENST00000516188 119 ntBASIC1.54□□□□□ -2.16
GPC1P35052 RNU6-656P-201ENST00000516785 107 ntBASIC1.54□□□□□ -2.16
GPC1P35052 SNORA40.17-201ENST00000517256 115 ntBASIC1.54□□□□□ -2.16
GPC1P35052 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
GPC1P35052 MIR3612-201ENST00000579753 87 ntBASIC1.54□□□□□ -2.16
GPC1P35052 MIR466-201ENST00000580653 84 ntBASIC1.54□□□□□ -2.16
GPC1P35052 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.54□□□□□ -2.16
GPC1P35052 RNU6-1079P-201ENST00000362861 110 ntBASIC1.53□□□□□ -2.16
GPC1P35052 RNA5SP484-201ENST00000458857 111 ntBASIC1.53□□□□□ -2.16
GPC1P35052 SCARNA21.1-201ENST00000515996 128 ntBASIC1.53□□□□□ -2.16
GPC1P35052 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
GPC1P35052 MIR573-201ENST00000384964 99 ntBASIC1.52□□□□□ -2.17
GPC1P35052 SNORA17.3-201ENST00000391159 129 ntBASIC1.52□□□□□ -2.17
GPC1P35052 SNORD124-201ENST00000459577 104 ntBASIC1.52□□□□□ -2.17
GPC1P35052 RNU6-1089P-201ENST00000516473 104 ntBASIC1.52□□□□□ -2.17
GPC1P35052 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.52□□□□□ -2.17
GPC1P35052 AC018659.1-201ENST00000551083 169 ntBASIC1.52□□□□□ -2.17
GPC1P35052 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.52□□□□□ -2.17
GPC1P35052 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
GPC1P35052 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
GPC1P35052 SNORD114-4-201ENST00000363962 75 ntBASIC1.51□□□□□ -2.17
GPC1P35052 RNU6-1335P-201ENST00000365426 107 ntBASIC1.51□□□□□ -2.17
GPC1P35052 MIR6739-201ENST00000622461 75 ntBASIC1.51□□□□□ -2.17
GPC1P35052 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
GPC1P35052 RNA5SP215-201ENST00000363440 122 ntBASIC1.5□□□□□ -2.17
GPC1P35052 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
GPC1P35052 RNU6-940P-201ENST00000363433 104 ntBASIC1.49□□□□□ -2.17
GPC1P35052 SNORA8.2-201ENST00000384372 139 ntBASIC1.49□□□□□ -2.17
GPC1P35052 RNU6-1162P-201ENST00000384443 104 ntBASIC1.49□□□□□ -2.17
GPC1P35052 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
GPC1P35052 SCARNA16.5-201ENST00000517114 183 ntBASIC1.49□□□□□ -2.17
GPC1P35052 BX248123.2-201ENST00000606318 124 ntBASIC1.49□□□□□ -2.17
GPC1P35052 RNU6-829P-201ENST00000363700 112 ntBASIC1.48□□□□□ -2.17
GPC1P35052 RNA5SP190-201ENST00000365222 118 ntBASIC1.48□□□□□ -2.17
GPC1P35052 AC108667.1-201ENST00000428618 249 ntBASIC1.48□□□□□ -2.17
GPC1P35052 AL157398.1-201ENST00000452981 186 ntBASIC1.48□□□□□ -2.17
GPC1P35052 RNU6-302P-201ENST00000365249 107 ntBASIC1.47□□□□□ -2.17
GPC1P35052 RNA5SP227-201ENST00000516184 113 ntBASIC1.47□□□□□ -2.17
GPC1P35052 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
GPC1P35052 AC021146.9-201ENST00000512503 156 ntBASIC1.46□□□□□ -2.18
GPC1P35052 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
GPC1P35052 MIR19B1-201ENST00000384829 87 ntBASIC1.45□□□□□ -2.18
GPC1P35052 MIR200A-201ENST00000384875 90 ntBASIC1.45□□□□□ -2.18
GPC1P35052 Y_RNA.250-201ENST00000364542 110 ntBASIC1.44□□□□□ -2.18
GPC1P35052 Y_RNA.338-201ENST00000365320 114 ntBASIC1.44□□□□□ -2.18
GPC1P35052 AC011195.1-201ENST00000578177 177 ntBASIC1.44□□□□□ -2.18
GPC1P35052 AC025627.3-201ENST00000582078 182 ntBASIC1.44□□□□□ -2.18
GPC1P35052 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
GPC1P35052 Y_RNA.236-201ENST00000364427 111 ntBASIC1.43□□□□□ -2.18
GPC1P35052 MIR521-2-201ENST00000384818 87 ntBASIC1.43□□□□□ -2.18
GPC1P35052 MIR630-201ENST00000384957 97 ntBASIC1.43□□□□□ -2.18
GPC1P35052 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
GPC1P35052 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
GPC1P35052 SNORA67.6-201ENST00000391093 99 ntBASIC1.42□□□□□ -2.18
GPC1P35052 SNORA75.1-201ENST00000391130 148 ntBASIC1.42□□□□□ -2.18
GPC1P35052 MIR4473-201ENST00000583731 91 ntBASIC1.42□□□□□ -2.18
GPC1P35052 RNU6-92P-201ENST00000605893 104 ntBASIC1.42□□□□□ -2.18
GPC1P35052 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
GPC1P35052 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
GPC1P35052 MIR4303-201ENST00000581299 66 ntBASIC1.41□□□□□ -2.18
GPC1P35052 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.41□□□□□ -2.18
GPC1P35052 AL162376.1-201ENST00000624117 175 ntBASIC1.41□□□□□ -2.18
GPC1P35052 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
GPC1P35052 MIR1323-201ENST00000408090 73 ntBASIC1.4□□□□□ -2.19
GPC1P35052 SNORD99-201ENST00000408612 74 ntBASIC1.4□□□□□ -2.19
GPC1P35052 RNU4-62P-201ENST00000410125 130 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms