Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.77□□□□□ -2.69
TRAV3A0A0B4J244 MIR5591-201ENST00000578248 65 ntBASIC-1.77□□□□□ -2.69
TRAV3A0A0B4J244 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 MIR759-201ENST00000390224 91 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 RNU6-65P-201ENST00000516332 98 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 RNU6-988P-201ENST00000519081 107 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 MIR4770-201ENST00000579149 58 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 MIR4536-1-201ENST00000583537 88 ntBASIC-1.78□□□□□ -2.69
TRAV3A0A0B4J244 MIR548D2-201ENST00000384955 97 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNU4-61P-201ENST00000411243 107 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNU7-85P-201ENST00000458851 63 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-732P-201ENST00000516033 103 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.79□□□□□ -2.7
TRAV3A0A0B4J244 RNA5SP26-201ENST00000362406 119 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 RNY1P11-201ENST00000363759 113 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.527-201ENST00000384573 102 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 U6atac.1-201ENST00000616025 117 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 MIR6129-201ENST00000616087 109 ntBASIC-1.8□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-409P-201ENST00000384114 104 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 AC022028.1-201ENST00000412054 408 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 MIR3140-201ENST00000583685 90 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 MIR6502-201ENST00000617296 76 ntBASIC-1.81□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-312P-201ENST00000364629 107 ntBASIC-1.82□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-132P-201ENST00000383863 107 ntBASIC-1.82□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.82□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-875P-201ENST00000516488 106 ntBASIC-1.82□□□□□ -2.7
TRAV3A0A0B4J244 AC025521.1-201ENST00000621624 286 ntBASIC-1.82□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.83□□□□□ -2.7
TRAV3A0A0B4J244 SNORD115-22-201ENST00000364456 82 ntBASIC-1.83□□□□□ -2.7
TRAV3A0A0B4J244 RNA5SP272-201ENST00000516095 111 ntBASIC-1.83□□□□□ -2.7
TRAV3A0A0B4J244 MIR3121-201ENST00000579680 77 ntBASIC-1.83□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-164P-201ENST00000364604 103 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 RNU6-474P-201ENST00000384243 107 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 MIR8485-201ENST00000401372 91 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 MIR1255B2-201ENST00000408618 67 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 RNA5SP136-201ENST00000410906 107 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 RBMX2P4-201ENST00000441256 376 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 RNU7-154P-201ENST00000516194 62 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 RNU7-121P-201ENST00000516604 62 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 MIR4680-201ENST00000580906 66 ntBASIC-1.84□□□□□ -2.7
TRAV3A0A0B4J244 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-260P-201ENST00000384092 107 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 MT-TW-201ENST00000387382 68 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 MIR548U-201ENST00000390728 81 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 AL353691.2-201ENST00000443795 59 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 snoU13.17-201ENST00000458802 104 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 MIR3064-201ENST00000581130 66 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.85□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 SNORA33.1-201ENST00000364957 130 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-540P-201ENST00000384622 101 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 SNORD58.1-201ENST00000391313 66 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 MIR889-201ENST00000401280 79 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 CYP3A54P-201ENST00000566950 75 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 AC091912.2-201ENST00000624798 167 ntBASIC-1.86□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.87□□□□□ -2.71
TRAV3A0A0B4J244 MIR548P-201ENST00000408336 84 ntBASIC-1.87□□□□□ -2.71
TRAV3A0A0B4J244 RNU2-51P-201ENST00000410708 197 ntBASIC-1.87□□□□□ -2.71
TRAV3A0A0B4J244 AC130289.1-201ENST00000577321 73 ntBASIC-1.87□□□□□ -2.71
TRAV3A0A0B4J244 SNORA2.1-201ENST00000363089 137 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-918P-201ENST00000391219 106 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-62P-201ENST00000516526 102 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 MIR4795-201ENST00000584182 89 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 AC104996.3-201ENST00000590718 94 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 U6.104-201ENST00000637979 90 ntBASIC-1.88□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.89□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.89□□□□□ -2.71
TRAV3A0A0B4J244 AL513043.2-201ENST00000573941 143 ntBASIC-1.89□□□□□ -2.71
TRAV3A0A0B4J244 AC006254.2-201ENST00000603259 279 ntBASIC-1.89□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-880P-201ENST00000384526 107 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-713P-201ENST00000384761 107 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-239P-201ENST00000390990 99 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 MIR1302-6-201ENST00000408466 90 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-985P-201ENST00000410182 104 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 RNU6-983P-201ENST00000516004 103 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 MIR8062-201ENST00000621515 85 ntBASIC-1.9□□□□□ -2.71
TRAV3A0A0B4J244 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.91□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-119P-201ENST00000364882 107 ntBASIC-1.91□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.91□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.91□□□□□ -2.72
TRAV3A0A0B4J244 RNU6-382P-201ENST00000365181 106 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms