Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 RNU6-719P-201ENST00000516671 104 ntBASIC-1.23□□□□□ -2.61
VCX3BQ9H321 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 RNU6-363P-201ENST00000362895 105 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 RNU6-238P-201ENST00000363313 106 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 RNU6-312P-201ENST00000364629 107 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 SNORA62.4-201ENST00000365504 151 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 RNY3P14-201ENST00000384309 102 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 MIR548D2-201ENST00000384955 97 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 SNORD37.2-201ENST00000391075 66 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 snoU83B.1-201ENST00000517136 88 ntBASIC-1.24□□□□□ -2.61
VCX3BQ9H321 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 RNU6-990P-201ENST00000364385 104 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 SNORA33.2-201ENST00000365413 134 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 RNU6-639P-201ENST00000384074 107 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 SNORD58.1-201ENST00000391313 66 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 MIR378F-201ENST00000578143 78 ntBASIC-1.25□□□□□ -2.61
VCX3BQ9H321 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.26□□□□□ -2.61
VCX3BQ9H321 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.26□□□□□ -2.61
VCX3BQ9H321 MIR4464-201ENST00000580818 92 ntBASIC-1.26□□□□□ -2.61
VCX3BQ9H321 AL442128.1-201ENST00000615151 90 ntBASIC-1.26□□□□□ -2.61
VCX3BQ9H321 AC025521.1-201ENST00000621624 286 ntBASIC-1.26□□□□□ -2.61
VCX3BQ9H321 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 RNU6-409P-201ENST00000384114 104 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 RNU6-239P-201ENST00000390990 99 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 AC021146.9-201ENST00000512503 156 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 RNA5SP470-201ENST00000516463 106 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 AC090617.8-201ENST00000623339 167 ntBASIC-1.27□□□□□ -2.61
VCX3BQ9H321 RNU6-208P-201ENST00000362431 107 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 RNU6-495P-201ENST00000362995 107 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 MIR1265-201ENST00000408444 86 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 RNU6-65P-201ENST00000516332 98 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 RNU7-121P-201ENST00000516604 62 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 YWHAEP3-201ENST00000582767 121 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.28□□□□□ -2.61
VCX3BQ9H321 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 RNA5SP136-201ENST00000410906 107 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 RNU7-85P-201ENST00000458851 63 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 MIR3121-201ENST00000579680 77 ntBASIC-1.29□□□□□ -2.62
VCX3BQ9H321 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 RNU6-132P-201ENST00000383863 107 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 RNY1P9-201ENST00000532431 109 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 AC130289.1-201ENST00000577321 73 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 MIR3140-201ENST00000583685 90 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 AL353803.5-201ENST00000599815 141 ntBASIC-1.3□□□□□ -2.62
VCX3BQ9H321 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 SNORA63.2-201ENST00000362603 126 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 SNORD50.2-201ENST00000365465 70 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 SNORA24B-201ENST00000384176 131 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 RNA5SP25-201ENST00000410815 110 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 MTATP6P23-201ENST00000440153 476 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 RN7SKP19-201ENST00000516016 252 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 MIR4536-1-201ENST00000583537 88 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 U6.96-201ENST00000636425 70 ntBASIC-1.31□□□□□ -2.62
VCX3BQ9H321 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.32□□□□□ -2.62
VCX3BQ9H321 MIR1263-201ENST00000408324 86 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 MIR548F4-201ENST00000408515 105 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 RNU4-71P-201ENST00000516258 113 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 AL445584.3-201ENST00000617173 78 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 MIR6888-201ENST00000621977 67 ntBASIC-1.32□□□□□ -2.62
VCX3BQ9H321 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.32□□□□□ -2.62
VCX3BQ9H321 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 RNU6-460P-201ENST00000391158 108 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 RNU7-197P-201ENST00000458836 62 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 AC068339.1-201ENST00000526965 141 ntBASIC-1.33□□□□□ -2.62
VCX3BQ9H321 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.33□□□□□ -2.62
VCX3BQ9H321 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU6-915P-201ENST00000364943 103 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU6-816P-201ENST00000390914 107 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 SNORD75.2-201ENST00000408784 58 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 AC022559.1-201ENST00000520905 205 ntBASIC-1.34□□□□□ -2.62
VCX3BQ9H321 RNU7-24P-201ENST00000458867 62 ntBASIC-1.35□□□□□ -2.63
VCX3BQ9H321 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.35□□□□□ -2.63
VCX3BQ9H321 MIR3064-201ENST00000581130 66 ntBASIC-1.35□□□□□ -2.63
VCX3BQ9H321 MIR4801-201ENST00000582704 82 ntBASIC-1.35□□□□□ -2.63
VCX3BQ9H321 MIR4306-201ENST00000583390 91 ntBASIC-1.35□□□□□ -2.63
VCX3BQ9H321 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms