Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RNU2-35P-201ENST00000516446 142 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 RNU6-256P-201ENST00000516747 97 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 Y_RNA.301-201ENST00000364990 103 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 RNU6-763P-201ENST00000390865 106 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 MIR548AB-201ENST00000584917 84 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 AC005014.2-201ENST00000607795 599 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 AP000240.1-201ENST00000609910 452 ntBASIC-3.59□□□□□ -2.98
CFAP43Q8NDM7 RNU6-1252P-201ENST00000363054 104 ntBASIC-3.6□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.462-201ENST00000384268 102 ntBASIC-3.6□□□□□ -2.99
CFAP43Q8NDM7 RNU6-987P-201ENST00000384759 104 ntBASIC-3.6□□□□□ -2.99
CFAP43Q8NDM7 RNU6-764P-201ENST00000516396 105 ntBASIC-3.6□□□□□ -2.99
CFAP43Q8NDM7 RNU6-690P-201ENST00000365242 106 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.61□□□□□ -2.99
CFAP43Q8NDM7 RNU6-978P-201ENST00000364371 103 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 RNU6-608P-201ENST00000383927 104 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 SNORD77B-201ENST00000391112 67 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 MIR1244-1-201ENST00000612829 85 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 MIR1244-3-201ENST00000635744 85 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 MIR1244-2-201ENST00000636449 85 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 MIR1244-4-202ENST00000636813 85 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 TPTEP1-208ENST00000636884 213 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 RNU6-563P-201ENST00000364872 108 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.556-201ENST00000384677 113 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1228P-201ENST00000391014 107 ntBASIC-3.62□□□□□ -2.99
CFAP43Q8NDM7 MIR367-201ENST00000362299 68 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.521-201ENST00000384560 114 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1257P-201ENST00000384625 110 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1156P-201ENST00000410365 100 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 HSPE1P25-201ENST00000455484 251 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 MTND2P39-201ENST00000457230 764 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 AL022161.1-201ENST00000604390 213 ntBASIC-3.63□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1059P-201ENST00000363752 98 ntBASIC-3.64□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.64□□□□□ -2.99
CFAP43Q8NDM7 MIR521-2-201ENST00000384818 87 ntBASIC-3.64□□□□□ -2.99
CFAP43Q8NDM7 MT-TT-201ENST00000387460 66 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 RNA5SP147-201ENST00000516493 109 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 MIR548A1-201ENST00000385041 97 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 RNU6-141P-201ENST00000410499 105 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 RNU6-358P-201ENST00000516564 75 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 MTND3P12-201ENST00000559068 328 ntBASIC-3.65□□□□□ -2.99
CFAP43Q8NDM7 Y_RNA.199-201ENST00000364014 102 ntBASIC-3.66□□□□□ -3
CFAP43Q8NDM7 AC019235.1-201ENST00000503847 207 ntBASIC-3.66□□□□□ -3
CFAP43Q8NDM7 RNU6-507P-201ENST00000516045 100 ntBASIC-3.66□□□□□ -3
CFAP43Q8NDM7 MIR4536-1-201ENST00000583537 88 ntBASIC-3.66□□□□□ -3
CFAP43Q8NDM7 AC090617.10-201ENST00000624308 134 ntBASIC-3.66□□□□□ -3
CFAP43Q8NDM7 RNU6-99P-201ENST00000364721 107 ntBASIC-3.67□□□□□ -3
CFAP43Q8NDM7 MIR34C-201ENST00000384831 77 ntBASIC-3.67□□□□□ -3
CFAP43Q8NDM7 MRPS35P2-201ENST00000508242 191 ntBASIC-3.67□□□□□ -3
CFAP43Q8NDM7 AL021368.1-201ENST00000607490 540 ntBASIC-3.67□□□□□ -3
CFAP43Q8NDM7 Y_RNA.511-201ENST00000384514 103 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 RNU2-38P-201ENST00000410856 79 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 RNU7-110P-201ENST00000516891 62 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 MIR5693-201ENST00000577722 73 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 Y_RNA.622-201ENST00000411091 108 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 MIR3913-1-201ENST00000577744 102 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 MIR6509-201ENST00000614603 85 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 MIR6128-201ENST00000615528 109 ntBASIC-3.68□□□□□ -3
CFAP43Q8NDM7 RNU6-694P-201ENST00000364071 147 ntBASIC-3.69□□□□□ -3
CFAP43Q8NDM7 RNU6-630P-201ENST00000391258 106 ntBASIC-3.69□□□□□ -3
CFAP43Q8NDM7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-3.69□□□□□ -3
CFAP43Q8NDM7 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 RNU6-616P-201ENST00000384353 107 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 RNU6-297P-201ENST00000384636 107 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 RNU6-246P-201ENST00000384702 107 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 MIR526A2-201ENST00000390198 65 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 MIR513C-201ENST00000401352 84 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 SNORA79-201ENST00000408376 140 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 FGF7P7-201ENST00000514120 227 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 RNU6-75P-201ENST00000515944 104 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 AC005899.2-201ENST00000584353 90 ntBASIC-3.7□□□□□ -3
CFAP43Q8NDM7 Y_RNA.527-201ENST00000384573 102 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 MIR203A-201ENST00000384836 110 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 IGHVII-40-1-201ENST00000517316 58 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 AC018645.2-201ENST00000609151 472 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 Y_RNA.463-201ENST00000384271 102 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 RNU6-636P-201ENST00000384598 107 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 snoU13.17-201ENST00000458802 104 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 PISRT1.1-201ENST00000616930 107 ntBASIC-3.71□□□□□ -3
CFAP43Q8NDM7 SNORA63.2-201ENST00000362603 126 ntBASIC-3.72□□□□□ -3.01
CFAP43Q8NDM7 MIR624-201ENST00000385217 97 ntBASIC-3.72□□□□□ -3.01
CFAP43Q8NDM7 Y_RNA.793-201ENST00000411222 111 ntBASIC-3.72□□□□□ -3.01
CFAP43Q8NDM7 RNY4P25-201ENST00000459254 96 ntBASIC-3.72□□□□□ -3.01
CFAP43Q8NDM7 AC082651.2-201ENST00000496833 166 ntBASIC-3.72□□□□□ -3.01
CFAP43Q8NDM7 RNU6-1149P-201ENST00000516810 97 ntBASIC-3.72□□□□□ -3.01
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms