Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 RNU7-48P-201ENST00000458875 63 ntBASIC0.54□□□□□ -2.32
SHISA7A6NL88 RNU6-772P-201ENST00000516042 105 ntBASIC0.54□□□□□ -2.32
SHISA7A6NL88 RNU7-2P-201ENST00000516096 62 ntBASIC0.54□□□□□ -2.32
SHISA7A6NL88 AC008608.1-201ENST00000603910 127 ntBASIC0.54□□□□□ -2.32
SHISA7A6NL88 MTND5P18-201ENST00000445624 1801 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 Y_RNA.174-201ENST00000363781 105 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 RNU6-187P-201ENST00000384139 106 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 Y_RNA.448-201ENST00000384185 108 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 RNU6-616P-201ENST00000384353 107 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 MIR206-201ENST00000384872 86 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 AC002350.1-201ENST00000490759 375 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 SNORA25.16-201ENST00000516741 121 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 MIR4514-201ENST00000581410 57 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 AL359881.1-201ENST00000602916 267 ntBASIC0.53□□□□□ -2.32
SHISA7A6NL88 SNORD115-19-201ENST00000363098 82 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 SNORD115-18-201ENST00000363293 82 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 Y_RNA.119-201ENST00000363301 96 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 SNORD115-17-201ENST00000364612 82 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 SNORD115-35-201ENST00000365122 82 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 MIR548D2-201ENST00000384955 97 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 RNU6-1321P-201ENST00000390905 107 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
SHISA7A6NL88 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 AC138749.4-201ENST00000563970 127 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 RNU7-10P-201ENST00000607194 63 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 uc_338.16-201ENST00000621804 95 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 AP001362.1-201ENST00000625165 124 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 U6.95-201ENST00000636931 70 ntBASIC0.52□□□□□ -2.33
SHISA7A6NL88 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SHISA7A6NL88 MIR18A-201ENST00000362310 71 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 Y_RNA.328-201ENST00000365208 113 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 VTRNA1-3-201ENST00000365645 89 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 SNORD38.2-201ENST00000384470 69 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 Y_RNA.507-201ENST00000384500 99 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 RNU6-429P-201ENST00000384582 108 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 Y_RNA.536-201ENST00000384621 113 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 RNU6-535P-201ENST00000384722 107 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 MIRLET7F2-201ENST00000385277 83 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 AL603908.1-201ENST00000406098 201 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 RNU6-531P-201ENST00000516694 104 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 AC087741.2-201ENST00000619415 172 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 MIR6086-201ENST00000638065 55 ntBASIC0.51□□□□□ -2.33
SHISA7A6NL88 Y_RNA.71-201ENST00000362892 104 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 MIR140-201ENST00000385282 100 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 AC096949.1-201ENST00000412047 152 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 MIR1270-201ENST00000459320 83 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
SHISA7A6NL88 SNORD116-14-201ENST00000383894 92 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 SNORD116-17-201ENST00000383929 92 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 SNORD116-15-201ENST00000384445 92 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 SNORD116-19-201ENST00000384729 92 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SHISA7A6NL88 SUMO1P3-201ENST00000439961 304 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 AC008267.6-201ENST00000441664 139 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 RNU7-107P-201ENST00000459121 61 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 RNU6-1234P-201ENST00000516877 103 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 Y_RNA.712-201ENST00000517011 92 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 MIR4500-201ENST00000579472 76 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 MIR548H5-201ENST00000580314 60 ntBASIC0.49□□□□□ -2.33
SHISA7A6NL88 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SHISA7A6NL88 Y_RNA.56-201ENST00000362798 112 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 RNU6-1229P-201ENST00000364295 107 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 RNU6-959P-201ENST00000384671 107 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 MT-TI-201ENST00000387365 69 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 RNU6-679P-201ENST00000391003 106 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 RNU6-521P-201ENST00000516663 105 ntBASIC0.48□□□□□ -2.33
SHISA7A6NL88 Y_RNA.155-201ENST00000363632 101 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNU4-67P-201ENST00000364569 141 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNU6-409P-201ENST00000384114 104 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNU6-291P-201ENST00000384720 107 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 MIR548A3-201ENST00000385297 97 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 Y_RNA.649-201ENST00000459077 103 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNU6-659P-201ENST00000516454 104 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 RNU6-62P-201ENST00000516526 102 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 MTND5P34-201ENST00000568888 325 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 MIR3678-201ENST00000578455 94 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 MIR3914-2-201ENST00000637339 95 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 AL512310.12-203ENST00000640543 90 ntBASIC0.47□□□□□ -2.33
SHISA7A6NL88 Y_RNA.127-201ENST00000363386 109 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 Y_RNA.218-201ENST00000364218 104 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 RNU6-81P-201ENST00000365608 104 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 MIR1912-201ENST00000410389 80 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 SNORA7.5-201ENST00000410672 110 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 Y_RNA.630-201ENST00000411370 108 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 RNU6-1333P-201ENST00000516162 93 ntBASIC0.46□□□□□ -2.34
SHISA7A6NL88 AC138869.1-201ENST00000568623 124 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms