Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 RNA5SP270-201ENST00000411361 118 ntBASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 SCARNA22-201ENST00000503991 125 ntBASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNU1-6P-201ENST00000516290 144 ntBASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIR5096-201ENST00000583713 70 ntBASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIR6853-201ENST00000619642 74 ntBASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1.4□□□□□ -2.19
KRTAP9-4Q9BYQ2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC008079.2-201ENST00000623543 20396 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 SNORD18C-201ENST00000362704 69 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 SNORD18A-201ENST00000363753 72 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNA5SP249-201ENST00000516127 99 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNA5SP402-201ENST00000517148 110 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 RN7SL690P-201ENST00000582087 240 ntBASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KRTAP9-4Q9BYQ2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 SNORA70F-201ENST00000384142 135 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC073264.2-201ENST00000448886 166 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC091153.1-201ENST00000466297 402 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 IGLV2-34-201ENST00000490007 283 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC008745.1-201ENST00000604064 271 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 snoR1.1-201ENST00000628177 80 ntBASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.38□□□□□ -2.19
KRTAP9-4Q9BYQ2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNU1-82P-201ENST00000390851 165 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNA5SP397-201ENST00000391323 118 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 U7.7-201ENST00000459276 60 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIR4529-201ENST00000578110 78 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 U6.97-201ENST00000636904 101 ntBASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP9-4Q9BYQ2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNA5SP505-201ENST00000364748 108 ntBASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 MIR100-201ENST00000385259 80 ntBASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 RNA5SP450-201ENST00000411206 102 ntBASIC1.36□□□□□ -2.19
KRTAP9-4Q9BYQ2 HMGN2P27-201ENST00000427352 270 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms