Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PSEN1P49768 SNORD90-201ENST00000391145 111 ntBASIC3.49□□□□□ -1.85
PSEN1P49768 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PSEN1P49768 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.49□□□□□ -1.85
PSEN1P49768 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PSEN1P49768 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PSEN1P49768 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PSEN1P49768 MIR653-201ENST00000385279 96 ntBASIC3.48□□□□□ -1.85
PSEN1P49768 MIR942-201ENST00000401111 86 ntBASIC3.48□□□□□ -1.85
PSEN1P49768 RNU4-47P-201ENST00000410876 114 ntBASIC3.48□□□□□ -1.85
PSEN1P49768 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
PSEN1P49768 SNORA31.15-201ENST00000516771 132 ntBASIC3.48□□□□□ -1.85
PSEN1P49768 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.48□□□□□ -1.85
PSEN1P49768 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.48□□□□□ -1.85
PSEN1P49768 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PSEN1P49768 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PSEN1P49768 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.48□□□□□ -1.85
PSEN1P49768 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.48□□□□□ -1.85
PSEN1P49768 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PSEN1P49768 RNU6-957P-201ENST00000363652 99 ntBASIC3.47□□□□□ -1.85
PSEN1P49768 RNU7-106P-201ENST00000459514 67 ntBASIC3.47□□□□□ -1.85
PSEN1P49768 RN7SL75P-201ENST00000461926 281 ntBASIC3.47□□□□□ -1.85
PSEN1P49768 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
PSEN1P49768 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PSEN1P49768 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
PSEN1P49768 MIR30D-201ENST00000362283 70 ntBASIC3.46□□□□□ -1.86
PSEN1P49768 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.46□□□□□ -1.86
PSEN1P49768 UBBP3-201ENST00000445497 241 ntBASIC3.46□□□□□ -1.86
PSEN1P49768 MIR6740-201ENST00000618268 113 ntBASIC3.46□□□□□ -1.86
PSEN1P49768 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PSEN1P49768 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PSEN1P49768 SNORA38.1-201ENST00000364172 131 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 RNU6-360P-201ENST00000390944 104 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.45□□□□□ -1.86
PSEN1P49768 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 snoU13.17-201ENST00000458802 104 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 DEFB122-202ENST00000569013 197 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 uc_338.1-201ENST00000612113 180 ntBASIC3.45□□□□□ -1.86
PSEN1P49768 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PSEN1P49768 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PSEN1P49768 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.45□□□□□ -1.86
PSEN1P49768 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PSEN1P49768 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PSEN1P49768 Y_RNA.333-201ENST00000365274 102 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 RNU1-51P-201ENST00000365345 176 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 MIR5680-201ENST00000577577 84 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 AC005520.4-201ENST00000604337 90 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 MIR7112-201ENST00000616126 65 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 U1.36-201ENST00000620684 176 ntBASIC3.44□□□□□ -1.86
PSEN1P49768 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PSEN1P49768 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
PSEN1P49768 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PSEN1P49768 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PSEN1P49768 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PSEN1P49768 RNU6-330P-201ENST00000363015 107 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 VTRNA1-1-201ENST00000363120 99 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 RNU6-396P-201ENST00000365369 105 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 RNU6-154P-201ENST00000384306 106 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 SNORA11.1-201ENST00000408133 129 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 RNU6-1165P-201ENST00000410119 107 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 SNORD63B-201ENST00000411005 70 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 SNORD111.1-201ENST00000516421 86 ntBASIC3.43□□□□□ -1.86
PSEN1P49768 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PSEN1P49768 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
PSEN1P49768 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PSEN1P49768 RNU4-82P-201ENST00000362443 140 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 Y_RNA.42-201ENST00000362660 108 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 RNU6-1051P-201ENST00000365471 102 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 SNORA67.4-201ENST00000384688 142 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 SNORA70.24-201ENST00000517233 118 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 MIR5004-201ENST00000579078 107 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 MIR4264-201ENST00000583520 66 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.42□□□□□ -1.86
PSEN1P49768 FO624990.1-201ENST00000636373 85 ntBASIC3.42□□□□□ -1.86
PSEN1P49768 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.42□□□□□ -1.86
PSEN1P49768 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PSEN1P49768 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.42□□□□□ -1.86
PSEN1P49768 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PSEN1P49768 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.41□□□□□ -1.86
PSEN1P49768 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PSEN1P49768 RNU6-53P-201ENST00000365367 106 ntBASIC3.41□□□□□ -1.86
PSEN1P49768 AC244636.1-201ENST00000421152 228 ntBASIC3.41□□□□□ -1.86
PSEN1P49768 RPL23AP83-201ENST00000434984 473 ntBASIC3.41□□□□□ -1.86
PSEN1P49768 RNU6-1194P-201ENST00000516208 104 ntBASIC3.41□□□□□ -1.86
PSEN1P49768 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.41□□□□□ -1.86
PSEN1P49768 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.41□□□□□ -1.86
PSEN1P49768 MIR3651-201ENST00000630427 90 ntBASIC3.41□□□□□ -1.86
PSEN1P49768 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
PSEN1P49768 RNU4-58P-201ENST00000363192 141 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 RNY4P3-201ENST00000365254 95 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 SNORA9-201ENST00000384215 133 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 RNU6-291P-201ENST00000384720 107 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 RNA5SP100-201ENST00000410903 110 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 RNA5SP59-201ENST00000410922 110 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 SUMO1P4-201ENST00000429430 302 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 RNU6-531P-201ENST00000516694 104 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 AP000942.3-201ENST00000603702 160 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.4□□□□□ -1.87
PSEN1P49768 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms