RNA–Protein interactions for RNA: ENST00000614872.4

PRKACB-219, Transcript of protein kinase cAMP-activated catalytic subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PRKACB, Length 4,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACB-219ENST00000614872 NISCHQ9Y2I1 1504 aa8.16□□□□□ -1.1
PRKACB-219ENST00000614872 CCDC180Q9P1Z9 1646 aa7.46□□□□□ -1.22
PRKACB-219ENST00000614872 AEBP2Q6ZN18 517 aaPredicted RBP7.18□□□□□ -1.26
PRKACB-219ENST00000614872 ABCC9O60706 1549 aa7.03□□□□□ -1.28
PRKACB-219ENST00000614872 MYO15BQ96JP2 1530 aa7□□□□□ -1.29
PRKACB-219ENST00000614872 NACADO15069 1562 aa6.96□□□□□ -1.3
PRKACB-219ENST00000614872 RB1CC1Q8TDY2 1594 aa6.95□□□□□ -1.3
PRKACB-219ENST00000614872 DCAF1Q9Y4B6 1507 aa6.91□□□□□ -1.3
PRKACB-219ENST00000614872 SHROOM4Q9ULL8 1493 aa6.83□□□□□ -1.32
PRKACB-219ENST00000614872 ZCCHC6Q5VYS8 1495 aaKnown RBP6.82□□□□□ -1.32
PRKACB-219ENST00000614872 CHIC1Q5VXU3 224 aa6.79□□□□□ -1.32
PRKACB-219ENST00000614872 UNC13AQ9UPW8 1703 aa6.78□□□□□ -1.32
PRKACB-219ENST00000614872 BICRAQ9NZM4 1560 aa6.7□□□□□ -1.34
PRKACB-219ENST00000614872 SCRIBQ14160 1630 aa6.55□□□□□ -1.36
PRKACB-219ENST00000614872 EIF4G1Q04637 1599 aaKnown RBP6.51□□□□□ -1.37
PRKACB-219ENST00000614872 CC2D2AQ9P2K1 1620 aa6.48□□□□□ -1.37
PRKACB-219ENST00000614872 DCAF8L2P0C7V8 631 aa6.46□□□□□ -1.37
PRKACB-219ENST00000614872 PABPN1Q86U42 306 aaKnown RBP eCLIP6.44□□□□□ -1.38
PRKACB-219ENST00000614872 DNAJC5BQ9UF47 199 aa6.42□□□□□ -1.38
PRKACB-219ENST00000614872 PEG3Q9GZU2 1588 aa6.41□□□□□ -1.38
PRKACB-219ENST00000614872 CECR2Q9BXF3 1484 aa6.4□□□□□ -1.39
PRKACB-219ENST00000614872 HMGXB3Q12766 1538 aa6.39□□□□□ -1.39
PRKACB-219ENST00000614872 SMARCA2P51531 1590 aa6.38□□□□□ -1.39
PRKACB-219ENST00000614872 SMARCA4P51532 1647 aa6.37□□□□□ -1.39
PRKACB-219ENST00000614872 BAZ1AQ9NRL2 1556 aaPredicted RBP6.37□□□□□ -1.39
PRKACB-219ENST00000614872 NCAPD3P42695 1498 aa6.37□□□□□ -1.39
PRKACB-219ENST00000614872 ATAD2BQ9ULI0 1458 aa6.3□□□□□ -1.4
PRKACB-219ENST00000614872 SENP3Q9H4L4 574 aaPredicted RBP6.25□□□□□ -1.41
PRKACB-219ENST00000614872 LAMC3Q9Y6N6 1575 aa6.25□□□□□ -1.41
PRKACB-219ENST00000614872 CUX2O14529 1486 aa6.24□□□□□ -1.41
PRKACB-219ENST00000614872 BAZ1BQ9UIG0 1483 aaKnown RBP6.24□□□□□ -1.41
PRKACB-219ENST00000614872 MROH2BQ7Z745 1585 aa6.21□□□□□ -1.41
PRKACB-219ENST00000614872 PRDM2Q13029 1718 aa6.21□□□□□ -1.42
PRKACB-219ENST00000614872 TOP2AP11388 1531 aaKnown RBP6.18□□□□□ -1.42
PRKACB-219ENST00000614872 THOC2Q8NI27 1593 aaKnown RBP6.17□□□□□ -1.42
PRKACB-219ENST00000614872 WIZO95785 1651 aa6.15□□□□□ -1.43
PRKACB-219ENST00000614872 PDS5BQ9NTI5 1447 aa6.13□□□□□ -1.43
PRKACB-219ENST00000614872 RSF1Q96T23 1441 aaPredicted RBP6.12□□□□□ -1.43
PRKACB-219ENST00000614872 WDR62O43379 1518 aa6.12□□□□□ -1.43
PRKACB-219ENST00000614872 KIF21AQ7Z4S6 1674 aa6.12□□□□□ -1.43
PRKACB-219ENST00000614872 ERCC6Q03468 1493 aa6.11□□□□□ -1.43
PRKACB-219ENST00000614872 CADPSQ9ULU8 1353 aa6.11□□□□□ -1.43
PRKACB-219ENST00000614872 CFTRP13569 1480 aa6.1□□□□□ -1.43
PRKACB-219ENST00000614872 PHF23Q9BUL5 403 aaPredicted RBP6.1□□□□□ -1.43
PRKACB-219ENST00000614872 MRC2Q9UBG0 1479 aa6.09□□□□□ -1.43
PRKACB-219ENST00000614872 POTEDQ86YR6 584 aa6.09□□□□□ -1.43
PRKACB-219ENST00000614872 WDR97A6NE52 1622 aa6.06□□□□□ -1.44
PRKACB-219ENST00000614872 NESP48681 1621 aa6.06□□□□□ -1.44
PRKACB-219ENST00000614872 CEP164Q9UPV0 1460 aa6.05□□□□□ -1.44
PRKACB-219ENST00000614872 ABCC8Q09428 1581 aa6.05□□□□□ -1.44
PRKACB-219ENST00000614872 FANCD2Q9BXW9 1451 aa6.03□□□□□ -1.44
PRKACB-219ENST00000614872 CCDC88BA6NC98 1476 aa6.01□□□□□ -1.45
PRKACB-219ENST00000614872 DNMBPQ6XZF7 1577 aa6□□□□□ -1.45
PRKACB-219ENST00000614872 URB2Q14146 1524 aaKnown RBP5.97□□□□□ -1.45
PRKACB-219ENST00000614872 IFT140Q96RY7 1462 aa5.97□□□□□ -1.45
PRKACB-219ENST00000614872 DNAJC5Q9H3Z4 198 aa5.95□□□□□ -1.46
PRKACB-219ENST00000614872 TOPBP1Q92547 1522 aa5.95□□□□□ -1.46
PRKACB-219ENST00000614872 TARBP1Q13395 1621 aaKnown RBP5.94□□□□□ -1.46
PRKACB-219ENST00000614872 BIVM-ERCC5R4GMW8 1640 aa5.91□□□□□ -1.46
PRKACB-219ENST00000614872 EIF4G3O43432 1585 aaKnown RBP5.9□□□□□ -1.46
PRKACB-219ENST00000614872 POLA1P09884 1462 aaPredicted RBP5.87□□□□□ -1.47
PRKACB-219ENST00000614872 ABCA5Q8WWZ7 1642 aa5.87□□□□□ -1.47
PRKACB-219ENST00000614872 CUX1P39880 1505 aa5.86□□□□□ -1.47
PRKACB-219ENST00000614872 TOP2BQ02880 1626 aa5.86□□□□□ -1.47
PRKACB-219ENST00000614872 PBRM1Q86U86 1689 aa5.86□□□□□ -1.47
PRKACB-219ENST00000614872 MAGI1Q96QZ7 1491 aaPredicted RBP5.86□□□□□ -1.47
PRKACB-219ENST00000614872 ABCA10Q8WWZ4 1543 aa5.85□□□□□ -1.47
PRKACB-219ENST00000614872 CHD1O14646 1710 aa5.84□□□□□ -1.47
PRKACB-219ENST00000614872 FGD5Q6ZNL6 1462 aa5.84□□□□□ -1.48
PRKACB-219ENST00000614872 FOXD1Q16676 465 aa5.83□□□□□ -1.48
PRKACB-219ENST00000614872 CLASP1Q7Z460 1538 aa5.83□□□□□ -1.48
PRKACB-219ENST00000614872 GRIN2BQ13224 1484 aa5.82□□□□□ -1.48
PRKACB-219ENST00000614872 SYNJ1O43426 1573 aa5.82□□□□□ -1.48
PRKACB-219ENST00000614872 ERICH3Q5RHP9 1530 aa5.81□□□□□ -1.48
PRKACB-219ENST00000614872 ZNF608Q9ULD9 1512 aaPredicted RBP5.81□□□□□ -1.48
PRKACB-219ENST00000614872 SOGA1O94964 1423 aa5.81□□□□□ -1.48
PRKACB-219ENST00000614872 ADAMTS12P58397 1594 aa5.8□□□□□ -1.48
PRKACB-219ENST00000614872 SYNJ2O15056 1496 aa5.8□□□□□ -1.48
PRKACB-219ENST00000614872 RIMBP3CA6NJZ7 1639 aa5.79□□□□□ -1.48
PRKACB-219ENST00000614872 RIMBP3BA6NNM3 1639 aa5.79□□□□□ -1.48
PRKACB-219ENST00000614872 RIMBP3Q9UFD9 1639 aa5.79□□□□□ -1.48
PRKACB-219ENST00000614872 WRNQ14191 1432 aaPredicted RBP eCLIP5.78□□□□□ -1.48
PRKACB-219ENST00000614872 OSCARQ8IYS5 282 aa5.78□□□□□ -1.48
PRKACB-219ENST00000614872 SHROOM2Q13796 1616 aa5.78□□□□□ -1.48
PRKACB-219ENST00000614872 CUL7Q14999 1698 aa5.78□□□□□ -1.48
PRKACB-219ENST00000614872 GAPVD1Q14C86 1478 aa5.77□□□□□ -1.49
PRKACB-219ENST00000614872 SNAPC4Q5SXM2 1469 aa5.77□□□□□ -1.49
PRKACB-219ENST00000614872 RAD54L2Q9Y4B4 1467 aa5.76□□□□□ -1.49
PRKACB-219ENST00000614872 ARHGEF11O15085 1522 aa5.76□□□□□ -1.49
PRKACB-219ENST00000614872 NUP160Q12769 1436 aa5.75□□□□□ -1.49
PRKACB-219ENST00000614872 AQRO60306 1485 aaKnown RBP eCLIP5.75□□□□□ -1.49
PRKACB-219ENST00000614872 FHAD1B1AJZ9 1412 aa5.74□□□□□ -1.49
PRKACB-219ENST00000614872 GRIN2AQ12879 1464 aa5.73□□□□□ -1.49
PRKACB-219ENST00000614872 RUSC2Q8N2Y8 1516 aa5.71□□□□□ -1.5
PRKACB-219ENST00000614872 CEP170Q5SW79 1584 aa5.71□□□□□ -1.5
PRKACB-219ENST00000614872 ARAP1Q96P48 1450 aa5.7□□□□□ -1.5
PRKACB-219ENST00000614872 TDRD9Q8NDG6 1382 aaKnown RBP5.69□□□□□ -1.5
PRKACB-219ENST00000614872 KIF27Q86VH2 1401 aa5.68□□□□□ -1.5
PRKACB-219ENST00000614872 KIAA0586Q9BVV6 1533 aa5.66□□□□□ -1.5
PRKACB-219ENST00000614872 SUPT5HO00267 1087 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms