Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RNU6-861P-201ENST00000516745 106 ntBASIC1.13□□□□□ -2.23
LSM4Q9Y4Z0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.13□□□□□ -2.23
LSM4Q9Y4Z0 AC090425.1-201ENST00000610007 140 ntBASIC1.13□□□□□ -2.23
LSM4Q9Y4Z0 MIR376A2-201ENST00000636782 80 ntBASIC1.13□□□□□ -2.23
LSM4Q9Y4Z0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-682P-201ENST00000363843 106 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-396P-201ENST00000365369 105 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.351-201ENST00000365436 96 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 MIR489-201ENST00000384923 84 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-239P-201ENST00000390990 99 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU7-90P-201ENST00000459216 62 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU7-80P-201ENST00000459562 61 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU7-121P-201ENST00000516604 62 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNU1-92P-201ENST00000517017 135 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 MIR8055-201ENST00000610739 97 ntBASIC1.12□□□□□ -2.23
LSM4Q9Y4Z0 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 RNU4-84P-201ENST00000364200 139 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.441-201ENST00000384123 112 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 MIR758-201ENST00000390227 88 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 AC063976.4-201ENST00000421971 163 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 AL354695.1-201ENST00000427935 228 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 AC108059.2-201ENST00000434626 151 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 RNU1-123P-201ENST00000458950 160 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 MIR2115-201ENST00000516657 100 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 MIR6516-201ENST00000630554 81 ntBASIC1.11□□□□□ -2.23
LSM4Q9Y4Z0 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-913P-201ENST00000390913 95 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 snoU13.18-201ENST00000459483 104 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 SNORA4-201ENST00000584302 138 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
LSM4Q9Y4Z0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 RNU6-768P-201ENST00000384683 107 ntBASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 MRPL35P3-201ENST00000421557 364 ntBASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 RNU2-11P-201ENST00000459191 187 ntBASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
LSM4Q9Y4Z0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-613P-201ENST00000410412 108 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 RNU2-64P-201ENST00000411315 191 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 SCARNA15-202ENST00000516881 127 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 MIR3646-201ENST00000578301 84 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 AL020996.3-201ENST00000606617 222 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 Z97988.1-201ENST00000637697 135 ntBASIC1.08□□□□□ -2.24
LSM4Q9Y4Z0 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 MIR342-201ENST00000362212 99 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 MT-TN-201ENST00000387400 73 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 MIR6844-201ENST00000637122 62 ntBASIC1.07□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-1082P-201ENST00000364574 107 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-53P-201ENST00000365367 106 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 MIR150-201ENST00000385048 84 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 SNORA75.5-201ENST00000391291 81 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 MIR548I3-201ENST00000408378 149 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 AC090844.1-201ENST00000422019 156 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 AC036111.3-201ENST00000526389 112 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 AC131055.1-201ENST00000584626 316 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 FTX_2.1-201ENST00000618816 94 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 AC091932.4-201ENST00000623386 200 ntBASIC1.06□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-654P-201ENST00000364373 107 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 SNORD113.3-201ENST00000364630 78 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 SNORD38B-201ENST00000384690 67 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 SNORD111-201ENST00000408139 94 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 RNA5SP261-201ENST00000410536 106 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-1149P-201ENST00000516810 97 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 RNU7-70P-201ENST00000516941 66 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 AC106800.4-201ENST00000614905 153 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 SNORD38B-202ENST00000625943 69 ntBASIC1.05□□□□□ -2.24
LSM4Q9Y4Z0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 MIR377-201ENST00000362145 69 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 SNORA1.1-201ENST00000364671 133 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-818P-201ENST00000364837 108 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-580P-201ENST00000365159 107 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-1336P-201ENST00000383886 109 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 RNU6-125P-201ENST00000384505 107 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 AC244023.1-201ENST00000426884 112 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 MIR3152-201ENST00000579801 74 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 MIR4264-201ENST00000583520 66 ntBASIC1.04□□□□□ -2.24
LSM4Q9Y4Z0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms