Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 AC008040.2-201ENST00000461049 708 ntBASIC18.25■□□□□ 0.51
KRT78Q8N1N4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 DGCR10-201ENST00000609839 495 ntBASIC18.25■□□□□ 0.51
KRT78Q8N1N4 AC026471.5-201ENST00000615068 467 ntBASIC18.25■□□□□ 0.51
KRT78Q8N1N4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT78Q8N1N4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 MESTP1-201ENST00000404287 994 ntBASIC18.24■□□□□ 0.51
KRT78Q8N1N4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 CKBP1-201ENST00000565489 1086 ntBASIC18.24■□□□□ 0.51
KRT78Q8N1N4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 AC006333.2-201ENST00000607957 2099 ntBASIC18.24■□□□□ 0.51
KRT78Q8N1N4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT78Q8N1N4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.23■□□□□ 0.51
KRT78Q8N1N4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.23■□□□□ 0.51
KRT78Q8N1N4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KRT78Q8N1N4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms