Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 MIR889-201ENST00000401280 79 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 FO393413.1-201ENST00000402892 195 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 SRIP3-201ENST00000413200 219 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.93□□□□□ -1.78
COL9A1P20849 IGLV3-17-201ENST00000519099 244 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
COL9A1P20849 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.93□□□□□ -1.78
COL9A1P20849 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL9A1P20849 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL9A1P20849 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL9A1P20849 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.93□□□□□ -1.78
COL9A1P20849 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.93□□□□□ -1.78
COL9A1P20849 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL9A1P20849 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.92□□□□□ -1.78
COL9A1P20849 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
COL9A1P20849 CST2P1-201ENST00000425770 87 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 ATP5J2P3-201ENST00000451550 258 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 SNORD105B-201ENST00000458770 79 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 AL163195.1-201ENST00000496941 348 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 RNA5SP33-201ENST00000516687 98 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 MIR548AE2-201ENST00000583456 67 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 MIR4712-201ENST00000583750 82 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 AL356280.1-201ENST00000603614 379 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 UCA1.1-201ENST00000620952 75 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL9A1P20849 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
COL9A1P20849 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL9A1P20849 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL9A1P20849 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
COL9A1P20849 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.91□□□□□ -1.78
COL9A1P20849 AC090844.1-201ENST00000422019 156 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 TRIAP1P1-201ENST00000427062 225 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 RN7SL297P-201ENST00000483161 293 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 AC022695.1-201ENST00000522089 237 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 AC103810.7-201ENST00000607821 91 ntBASIC3.91□□□□□ -1.78
COL9A1P20849 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
COL9A1P20849 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL9A1P20849 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL9A1P20849 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL9A1P20849 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL9A1P20849 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL9A1P20849 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
COL9A1P20849 ICE2P2-201ENST00000483823 2787 ntBASIC3.9□□□□□ -1.78
COL9A1P20849 ZNF962P-201ENST00000443465 3140 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 RNA5SP502-201ENST00000362694 119 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 RNU1-23P-201ENST00000363361 144 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 Y_RNA.565-201ENST00000384719 101 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 RNA5SP261-201ENST00000410536 106 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 Y_RNA.609-201ENST00000410669 89 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 RNU2-48P-201ENST00000410694 191 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 RNU2-63P-201ENST00000410792 194 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 AC069257.2-201ENST00000441819 155 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 AC145423.2-201ENST00000610631 239 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 uc_338.25-201ENST00000613756 156 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 MIR376B-201ENST00000614515 100 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 AL137790.1-201ENST00000634283 177 ntBASIC3.9□□□□□ -1.79
COL9A1P20849 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
COL9A1P20849 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.9□□□□□ -1.79
COL9A1P20849 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.79
COL9A1P20849 Z83843.1-201ENST00000604070 3685 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL9A1P20849 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
COL9A1P20849 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL9A1P20849 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL9A1P20849 SCN1A-220ENST00000641603 12506 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL9A1P20849 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.89□□□□□ -1.79
COL9A1P20849 SNORA22.1-201ENST00000362701 134 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 HDGFP1-201ENST00000405943 252 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 RNU6-1258P-201ENST00000516911 111 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.89□□□□□ -1.79
COL9A1P20849 OTUD4P1-201ENST00000237841 3067 ntBASIC3.89□□□□□ -1.79
COL9A1P20849 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
COL9A1P20849 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
COL9A1P20849 SNORA25.6-201ENST00000364121 118 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 MIR218-1-201ENST00000384999 110 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 HLA-N-201ENST00000437516 135 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 MIR3162-201ENST00000581818 82 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 GABRG2-229ENST00000641017 3628 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
COL9A1P20849 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.88□□□□□ -1.79
COL9A1P20849 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
COL9A1P20849 AC096644.4-201ENST00000563417 2912 ntBASIC3.88□□□□□ -1.79
COL9A1P20849 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
COL9A1P20849 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
COL9A1P20849 Y_RNA.140-201ENST00000363474 103 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 SNORA70.7-201ENST00000384159 133 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 Y_RNA.470-201ENST00000384307 117 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 MIR1267-201ENST00000408723 78 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 CYCSP4-201ENST00000429682 331 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 AL161932.1-201ENST00000437408 146 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 MIR1270-201ENST00000459320 83 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 AC114811.1-201ENST00000507207 168 ntBASIC3.87□□□□□ -1.79
COL9A1P20849 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 345.4 ms