RNA–Protein interactions for RNA: ENST00000410694.1

RNU2-48P-201, Transcript of RNA, U2 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU2-48P, Length 191 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-48P-201ENST00000410694 CHIC1Q5VXU3 224 aa8.23□□□□□ -1.09
RNU2-48P-201ENST00000410694 AEBP2Q6ZN18 517 aaPredicted RBP8.14□□□□□ -1.11
RNU2-48P-201ENST00000410694 PHF23Q9BUL5 403 aaPredicted RBP7.24□□□□□ -1.25
RNU2-48P-201ENST00000410694 SENP3Q9H4L4 574 aaPredicted RBP6.93□□□□□ -1.3
RNU2-48P-201ENST00000410694 PLPPR3Q6T4P5 718 aa6.85□□□□□ -1.31
RNU2-48P-201ENST00000410694 ADRA2BP18089 450 aa6.42□□□□□ -1.38
RNU2-48P-201ENST00000410694 FOXD1Q16676 465 aa6.38□□□□□ -1.39
RNU2-48P-201ENST00000410694 PPP6R1Q9UPN7 881 aa6.34□□□□□ -1.39
RNU2-48P-201ENST00000410694 EHMT2Q96KQ7 1210 aa6.24□□□□□ -1.41
RNU2-48P-201ENST00000410694 KCNA4P22459 653 aa6.23□□□□□ -1.41
RNU2-48P-201ENST00000410694 PIAS4Q8N2W9 510 aaPredicted RBP6.17□□□□□ -1.42
RNU2-48P-201ENST00000410694 PPP4R3CPQ6ZMV5 832 aa6.09□□□□□ -1.43
RNU2-48P-201ENST00000410694 NCBP3Q53F19 620 aaKnown RBP6.05□□□□□ -1.44
RNU2-48P-201ENST00000410694 SLC4A1APQ9BWU0 796 aaKnown RBP6.03□□□□□ -1.44
RNU2-48P-201ENST00000410694 SCAF1Q9H7N4 1312 aaKnown RBP5.91□□□□□ -1.46
RNU2-48P-201ENST00000410694 CSRNP3Q8WYN3 585 aa5.9□□□□□ -1.46
RNU2-48P-201ENST00000410694 NPM3O75607 178 aaKnown RBP5.88□□□□□ -1.47
RNU2-48P-201ENST00000410694 CNKSR2Q8WXI2 1034 aa5.83□□□□□ -1.48
RNU2-48P-201ENST00000410694 MSH5O43196 834 aa5.81□□□□□ -1.48
RNU2-48P-201ENST00000410694 MAPK8IP2Q13387 824 aaPredicted RBP5.74□□□□□ -1.49
RNU2-48P-201ENST00000410694 ZBTB22O15209 634 aa5.67□□□□□ -1.5
RNU2-48P-201ENST00000410694 FOXD4L1Q9NU39 408 aa5.66□□□□□ -1.5
RNU2-48P-201ENST00000410694 RNF216Q9NWF9 866 aaPredicted RBP5.63□□□□□ -1.51
RNU2-48P-201ENST00000410694 DCAF8L1A6NGE4 600 aa5.53□□□□□ -1.52
RNU2-48P-201ENST00000410694 DMRT2Q9Y5R5 561 aa5.53□□□□□ -1.52
RNU2-48P-201ENST00000410694 HOXD11P31277 338 aaPredicted RBP5.49□□□□□ -1.53
RNU2-48P-201ENST00000410694 MYCNP04198 464 aaPredicted RBP5.45□□□□□ -1.54
RNU2-48P-201ENST00000410694 SLC4A2P04920 1241 aa5.45□□□□□ -1.54
RNU2-48P-201ENST00000410694 DNAJC5BQ9UF47 199 aa5.45□□□□□ -1.54
RNU2-48P-201ENST00000410694 FKBP8Q14318 412 aa5.42□□□□□ -1.54
RNU2-48P-201ENST00000410694 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.42□□□□□ -1.54
RNU2-48P-201ENST00000410694 ATXN8OSP0DMR3 200 aa5.38□□□□□ -1.55
RNU2-48P-201ENST00000410694 AMER1Q5JTC6 1135 aaPredicted RBP5.36□□□□□ -1.55
RNU2-48P-201ENST00000410694 RTN4Q9NQC3 1192 aaKnown RBP5.35□□□□□ -1.55
RNU2-48P-201ENST00000410694 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.32□□□□□ -1.56
RNU2-48P-201ENST00000410694 HNRNPUL2Q1KMD3 747 aaKnown RBP5.32□□□□□ -1.56
RNU2-48P-201ENST00000410694 SLC24A1O60721 1099 aa5.3□□□□□ -1.56
RNU2-48P-201ENST00000410694 SAMD1Q6SPF0 538 aaPredicted RBP5.29□□□□□ -1.56
RNU2-48P-201ENST00000410694 ATF5Q9Y2D1 282 aaPredicted RBP5.26□□□□□ -1.57
RNU2-48P-201ENST00000410694 APLP2Q06481 763 aa5.22□□□□□ -1.57
RNU2-48P-201ENST00000410694 U3KPZ7 1027 aaPredicted RBP5.22□□□□□ -1.57
RNU2-48P-201ENST00000410694 ZNF219Q9P2Y4 722 aaPredicted RBP5.19□□□□□ -1.58
RNU2-48P-201ENST00000410694 TRHP20396 242 aaPredicted RBP5.17□□□□□ -1.58
RNU2-48P-201ENST00000410694 DCAF8L2P0C7V8 631 aa5.16□□□□□ -1.58
RNU2-48P-201ENST00000410694 FBXO3Q9UK99 471 aa5.14□□□□□ -1.59
RNU2-48P-201ENST00000410694 SPDYE4A6NLX3 237 aa5.13□□□□□ -1.59
RNU2-48P-201ENST00000410694 FBLN2P98095 1184 aa5.13□□□□□ -1.59
RNU2-48P-201ENST00000410694 CAPN15O75808 1086 aa5.12□□□□□ -1.59
RNU2-48P-201ENST00000410694 POLA2Q14181 598 aa5.08□□□□□ -1.6
RNU2-48P-201ENST00000410694 SPINK5Q9NQ38 1064 aaPredicted RBP5.05□□□□□ -1.6
RNU2-48P-201ENST00000410694 KLHL34Q8N239 644 aa5.03□□□□□ -1.6
RNU2-48P-201ENST00000410694 ABCB7O75027 752 aa5.02□□□□□ -1.61
RNU2-48P-201ENST00000410694 VASPP50552 380 aaPredicted RBP5.02□□□□□ -1.61
RNU2-48P-201ENST00000410694 MKRN4PQ13434 485 aaPredicted RBP5.02□□□□□ -1.61
RNU2-48P-201ENST00000410694 HAP1P54257 671 aaPredicted RBP5□□□□□ -1.61
RNU2-48P-201ENST00000410694 ZBTB12Q9Y330 459 aaPredicted RBP4.97□□□□□ -1.61
RNU2-48P-201ENST00000410694 IFNLR1Q8IU57 520 aaPredicted RBP4.95□□□□□ -1.62
RNU2-48P-201ENST00000410694 PLCD3Q8N3E9 789 aa4.95□□□□□ -1.62
RNU2-48P-201ENST00000410694 ZNF692Q9BU19 519 aaPredicted RBP4.95□□□□□ -1.62
RNU2-48P-201ENST00000410694 RNF39Q9H2S5 420 aa4.95□□□□□ -1.62
RNU2-48P-201ENST00000410694 C1QBPQ07021 282 aaKnown RBP4.94□□□□□ -1.62
RNU2-48P-201ENST00000410694 PLCB2Q00722 1185 aa4.93□□□□□ -1.62
RNU2-48P-201ENST00000410694 MIER1Q8N108 512 aa4.93□□□□□ -1.62
RNU2-48P-201ENST00000410694 ECM2O94769 699 aaPredicted RBP4.91□□□□□ -1.62
RNU2-48P-201ENST00000410694 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.91□□□□□ -1.62
RNU2-48P-201ENST00000410694 PLEKHG5O94827 1062 aa4.9□□□□□ -1.63
RNU2-48P-201ENST00000410694 SPOCK2Q92563 424 aa4.9□□□□□ -1.63
RNU2-48P-201ENST00000410694 CFAP44Q96MT7 982 aa4.89□□□□□ -1.63
RNU2-48P-201ENST00000410694 CIZ1Q9ULV3 898 aaPredicted RBP4.89□□□□□ -1.63
RNU2-48P-201ENST00000410694 PROM2Q8N271 834 aa4.88□□□□□ -1.63
RNU2-48P-201ENST00000410694 PABPN1Q86U42 306 aaKnown RBP eCLIP4.87□□□□□ -1.63
RNU2-48P-201ENST00000410694 STAG3Q9UJ98 1225 aa4.87□□□□□ -1.63
RNU2-48P-201ENST00000410694 PKD2Q13563 968 aa4.86□□□□□ -1.63
RNU2-48P-201ENST00000410694 PAXIP1Q6ZW49 1069 aaPredicted RBP4.86□□□□□ -1.63
RNU2-48P-201ENST00000410694 OSCARQ8IYS5 282 aa4.86□□□□□ -1.63
RNU2-48P-201ENST00000410694 SPDYE2BA6NHP3 402 aa4.83□□□□□ -1.64
RNU2-48P-201ENST00000410694 SPDYE6P0CI01 402 aa4.83□□□□□ -1.64
RNU2-48P-201ENST00000410694 DSG3P32926 999 aa4.83□□□□□ -1.64
RNU2-48P-201ENST00000410694 SPDYE2Q495Y8 402 aa4.83□□□□□ -1.64
RNU2-48P-201ENST00000410694 BCANQ96GW7 911 aa4.83□□□□□ -1.64
RNU2-48P-201ENST00000410694 POTEDQ86YR6 584 aa4.81□□□□□ -1.64
RNU2-48P-201ENST00000410694 VSIG10Q8N0Z9 540 aa4.81□□□□□ -1.64
RNU2-48P-201ENST00000410694 BBXQ8WY36 941 aaPredicted RBP4.81□□□□□ -1.64
RNU2-48P-201ENST00000410694 ZBTB47Q9UFB7 747 aaPredicted RBP4.81□□□□□ -1.64
RNU2-48P-201ENST00000410694 CHGAP10645 457 aaKnown RBP4.8□□□□□ -1.64
RNU2-48P-201ENST00000410694 SPRYD3Q8NCJ5 442 aa4.79□□□□□ -1.64
RNU2-48P-201ENST00000410694 RGL2O15211 777 aa4.78□□□□□ -1.64
RNU2-48P-201ENST00000410694 CACNB1Q02641 598 aaPredicted RBP4.78□□□□□ -1.64
RNU2-48P-201ENST00000410694 PRKCSHP14314 528 aaPredicted RBP4.76□□□□□ -1.65
RNU2-48P-201ENST00000410694 DCAF8Q5TAQ9 597 aa4.76□□□□□ -1.65
RNU2-48P-201ENST00000410694 CLEC11AQ9Y240 323 aa4.76□□□□□ -1.65
RNU2-48P-201ENST00000410694 SSUH2Q9Y2M2 353 aa4.76□□□□□ -1.65
RNU2-48P-201ENST00000410694 NPM1P06748 294 aaKnown RBP eCLIP4.75□□□□□ -1.65
RNU2-48P-201ENST00000410694 GSE1Q14687 1217 aa4.72□□□□□ -1.65
RNU2-48P-201ENST00000410694 TPRNQ4KMQ1 711 aa4.72□□□□□ -1.65
RNU2-48P-201ENST00000410694 TSHZ2Q9NRE2 1034 aa4.72□□□□□ -1.65
RNU2-48P-201ENST00000410694 TAOK2Q9UL54 1235 aa4.71□□□□□ -1.66
RNU2-48P-201ENST00000410694 KDM2AQ9Y2K7 1162 aa4.71□□□□□ -1.66
RNU2-48P-201ENST00000410694 PRR29P0C7W0 189 aa4.7□□□□□ -1.66
RNU2-48P-201ENST00000410694 NBR1Q14596 966 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms