Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 Y_RNA.272-201ENST00000364696 102 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 RNU1-51P-201ENST00000365345 176 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 RNA5SP501-201ENST00000410990 112 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 SNRPGP10-201ENST00000432323 225 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 RPS27P1-201ENST00000450552 247 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 RNA5SP341-201ENST00000516261 117 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 U1.36-201ENST00000620684 176 ntBASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.54□□□□□ -2
TRBV23-1A0A0A0MS06 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 MIR22-201ENST00000362190 85 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 MIR126-201ENST00000362291 85 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 RNU4-84P-201ENST00000364200 139 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 MIR548M-201ENST00000408260 86 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 Y_RNA.622-201ENST00000411091 108 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 MTND2P29-201ENST00000438595 412 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 RNU6-561P-201ENST00000516222 102 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 RNU6-255P-201ENST00000516957 105 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 MIR3144-201ENST00000579460 79 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 RPL12P50-201ENST00000603116 116 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 AC012640.5-201ENST00000623897 319 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 AC021753.1-201ENST00000635724 168 ntBASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TRBV23-1A0A0A0MS06 Y_RNA.8-201ENST00000362353 102 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORA71.1-201ENST00000364523 117 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-804P-201ENST00000384286 107 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU2-55P-201ENST00000411146 174 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 RN7SL20P-201ENST00000488827 297 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC107027.2-201ENST00000512197 115 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 SUB1P4-201ENST00000566062 339 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 MIR4325-201ENST00000583049 90 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL591926.4-201ENST00000616895 298 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL035425.3-201ENST00000564206 4996 ntBASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.52□□□□□ -2.01
TRBV23-1A0A0A0MS06 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORD45.3-201ENST00000363836 72 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORD67-201ENST00000390833 111 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-239P-201ENST00000390990 99 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORA79-201ENST00000408376 140 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNRPGP8-201ENST00000454064 226 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORD77.4-201ENST00000516158 81 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-1299P-201ENST00000516316 100 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-826P-201ENST00000516827 104 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 MIR8054-201ENST00000620877 86 ntBASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.51□□□□□ -2.01
TRBV23-1A0A0A0MS06 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORA63D-201ENST00000364359 132 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 Y_RNA.265-201ENST00000364677 108 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-643P-201ENST00000384018 107 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-851P-201ENST00000384565 107 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 MIR520A-201ENST00000384862 85 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-440P-201ENST00000390882 105 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNA5SP482-201ENST00000391269 118 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 NDUFB4P4-201ENST00000404822 243 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 SNORD88.1-201ENST00000408684 91 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU4-43P-201ENST00000410628 137 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC006461.1-201ENST00000412637 326 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 MLLT10P1-201ENST00000418346 262 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC008885.1-201ENST00000514930 301 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU7-28P-201ENST00000516759 62 ntBASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC007336.1-201ENST00000576365 3828 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 AC073325.2-201ENST00000339545 159 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 Y_RNA.170-201ENST00000363746 110 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 Y_RNA.398-201ENST00000383952 99 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 Y_RNA.432-201ENST00000384087 111 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-950P-201ENST00000384651 107 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU6-131P-201ENST00000391144 107 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 AL590004.2-201ENST00000404787 371 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 RNU2-7P-201ENST00000410794 178 ntBASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.49□□□□□ -2.01
TRBV23-1A0A0A0MS06 RN7SL633P-201ENST00000488974 297 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms