Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 MIR148B-201ENST00000362252 99 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 Y_RNA.35-201ENST00000362601 101 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 SNORA68.1-201ENST00000364537 132 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 MIR562-201ENST00000384894 95 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RNA5SP127-201ENST00000411051 133 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 Y_RNA.651-201ENST00000459380 103 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RPL21P10-201ENST00000463521 490 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RN7SKP19-201ENST00000516016 252 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RNU6-168P-201ENST00000516189 101 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RNU7-149P-201ENST00000516739 59 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 RNU6-856P-201ENST00000516959 98 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
IFT43Q96FT9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
IFT43Q96FT9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
IFT43Q96FT9 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.5□□□□□ -1.85
IFT43Q96FT9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
IFT43Q96FT9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
IFT43Q96FT9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
IFT43Q96FT9 RNA5SP89-201ENST00000410300 108 ntBASIC3.49□□□□□ -1.85
IFT43Q96FT9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
IFT43Q96FT9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.49□□□□□ -1.85
IFT43Q96FT9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.49□□□□□ -1.85
IFT43Q96FT9 MTATP6P21-201ENST00000440681 189 ntBASIC3.49□□□□□ -1.85
IFT43Q96FT9 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
IFT43Q96FT9 RNU6-365P-201ENST00000517113 106 ntBASIC3.49□□□□□ -1.85
IFT43Q96FT9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.49□□□□□ -1.85
IFT43Q96FT9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.49□□□□□ -1.85
IFT43Q96FT9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.48□□□□□ -1.85
IFT43Q96FT9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 RNU1-23P-201ENST00000363361 144 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 RNU6-880P-201ENST00000384526 107 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 MIRLET7F2-201ENST00000385277 83 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 MIR891A-201ENST00000401237 79 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
IFT43Q96FT9 RNU6-991P-201ENST00000516168 107 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 MIR2276-201ENST00000516886 89 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 AL365205.2-201ENST00000594586 68 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 AC006254.2-201ENST00000603259 279 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 JPX_2.1-201ENST00000614161 69 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
IFT43Q96FT9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
IFT43Q96FT9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.48□□□□□ -1.85
IFT43Q96FT9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
IFT43Q96FT9 MIR520G-201ENST00000385064 90 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 RNA5SP120-201ENST00000410900 112 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AL513477.1-202ENST00000417061 214 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AC060773.1-201ENST00000421698 310 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 Y_RNA.649-201ENST00000459077 103 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AC023141.11-201ENST00000508864 202 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 RNU6-1146P-201ENST00000516282 102 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 RNU6-781P-201ENST00000516377 101 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 SNORA48.11-201ENST00000517015 89 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 MIR3200-201ENST00000580767 85 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AL356280.1-201ENST00000603614 379 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AL022345.2-201ENST00000606307 135 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 AC025166.1-201ENST00000612411 163 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 MIR4679-1-201ENST00000637619 75 ntBASIC3.47□□□□□ -1.85
IFT43Q96FT9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
IFT43Q96FT9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
IFT43Q96FT9 AC008555.8-201ENST00000623602 2168 ntBASIC3.46□□□□□ -1.85
IFT43Q96FT9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
IFT43Q96FT9 AC091152.2-201ENST00000591628 2569 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT43Q96FT9 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 RNU1-96P-201ENST00000364163 162 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 RNU6-1164P-201ENST00000364428 107 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 SNORD17-201ENST00000390930 237 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 AC005326.1-201ENST00000429197 123 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 Y_RNA.694-201ENST00000516677 117 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 RNU1-104P-201ENST00000517280 175 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 MIR3651-201ENST00000630427 90 ntBASIC3.46□□□□□ -1.86
IFT43Q96FT9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT43Q96FT9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
IFT43Q96FT9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
IFT43Q96FT9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
IFT43Q96FT9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.46□□□□□ -1.86
IFT43Q96FT9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
IFT43Q96FT9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.45□□□□□ -1.86
IFT43Q96FT9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
IFT43Q96FT9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.45□□□□□ -1.86
IFT43Q96FT9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
IFT43Q96FT9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
IFT43Q96FT9 MIR340-201ENST00000362125 95 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 RNU6-508P-201ENST00000363231 103 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 RNU2-48P-201ENST00000410694 191 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 RNU2-63P-201ENST00000410792 194 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 Y_RNA.621-201ENST00000411065 96 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.45□□□□□ -1.86
IFT43Q96FT9 HMGN2P34-201ENST00000437647 269 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 RNU6-504P-201ENST00000516568 104 ntBASIC3.45□□□□□ -1.86
IFT43Q96FT9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.45□□□□□ -1.86
IFT43Q96FT9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
IFT43Q96FT9 AC017071.1-201ENST00000564407 2204 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 255.6 ms