RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 MYT1Q01538 1121 aa5.99□□□□□ -1.45
NEB-218ENST00000603639 PELP1Q8IZL8 1130 aaKnown RBP5.8□□□□□ -1.48
NEB-218ENST00000603639 YTHDC1Q96MU7 727 aaKnown RBP5.49□□□□□ -1.53
NEB-218ENST00000603639 CCER1Q8TC90 406 aaPredicted RBP5.49□□□□□ -1.53
NEB-218ENST00000603639 TTBK1Q5TCY1 1321 aaPredicted RBP5.46□□□□□ -1.54
NEB-218ENST00000603639 ZEB1P37275 1124 aaPredicted RBP5.42□□□□□ -1.54
NEB-218ENST00000603639 ERICH6Q7L0X2 663 aa5.3□□□□□ -1.56
NEB-218ENST00000603639 NISCHQ9Y2I1 1504 aa5.28□□□□□ -1.56
NEB-218ENST00000603639 CENPBP07199 599 aaPredicted RBP5.25□□□□□ -1.57
NEB-218ENST00000603639 FAM9AQ8IZU1 332 aaPredicted RBP5.16□□□□□ -1.58
NEB-218ENST00000603639 DAXXQ9UER7 740 aaPredicted RBP5.12□□□□□ -1.59
NEB-218ENST00000603639 MYT1LQ9UL68 1186 aa5.08□□□□□ -1.6
NEB-218ENST00000603639 RANGAP1P46060 587 aaPredicted RBP5.03□□□□□ -1.6
NEB-218ENST00000603639 DCAF8L2P0C7V8 631 aa5.02□□□□□ -1.61
NEB-218ENST00000603639 PCGF6Q9BYE7 350 aa5□□□□□ -1.61
NEB-218ENST00000603639 APLP2Q06481 763 aa5□□□□□ -1.61
NEB-218ENST00000603639 GLIPR1L2Q4G1C9 344 aa4.99□□□□□ -1.61
NEB-218ENST00000603639 CCDC180Q9P1Z9 1646 aa4.97□□□□□ -1.61
NEB-218ENST00000603639 ANP32EQ9BTT0 268 aa4.97□□□□□ -1.61
NEB-218ENST00000603639 CDK11AQ9UQ88 783 aaPredicted RBP4.96□□□□□ -1.61
NEB-218ENST00000603639 HRCP23327 699 aa4.96□□□□□ -1.62
NEB-218ENST00000603639 NEFLP07196 543 aa4.95□□□□□ -1.62
NEB-218ENST00000603639 NCLP19338 710 aaKnown RBP4.95□□□□□ -1.62
NEB-218ENST00000603639 TRIM26Q12899 539 aaPredicted RBP4.94□□□□□ -1.62
NEB-218ENST00000603639 CLSPNQ9HAW4 1339 aa4.88□□□□□ -1.63
NEB-218ENST00000603639 EHMT2Q96KQ7 1210 aa4.87□□□□□ -1.63
NEB-218ENST00000603639 TNNT2P45379 298 aaPredicted RBP4.86□□□□□ -1.63
NEB-218ENST00000603639 NEUROD1Q13562 356 aa4.86□□□□□ -1.63
NEB-218ENST00000603639 SUPT5HO00267 1087 aaKnown RBP4.82□□□□□ -1.64
NEB-218ENST00000603639 ANP32BQ92688 251 aaKnown RBP4.81□□□□□ -1.64
NEB-218ENST00000603639 SHROOM4Q9ULL8 1493 aa4.81□□□□□ -1.64
NEB-218ENST00000603639 ZBTB47Q9UFB7 747 aaPredicted RBP4.8□□□□□ -1.64
NEB-218ENST00000603639 DIEXFQ68CQ4 756 aaKnown RBP4.8□□□□□ -1.64
NEB-218ENST00000603639 RTL5Q5HYW3 569 aaPredicted RBP4.79□□□□□ -1.64
NEB-218ENST00000603639 PTMSP20962 102 aa4.79□□□□□ -1.64
NEB-218ENST00000603639 EIF5BO60841 1220 aaKnown RBP4.77□□□□□ -1.65
NEB-218ENST00000603639 PPARGC1BQ86YN6 1023 aaKnown RBP4.77□□□□□ -1.65
NEB-218ENST00000603639 ERICH6BQ5W0A0 696 aa4.77□□□□□ -1.65
NEB-218ENST00000603639 GTF3C3Q9Y5Q9 886 aa4.76□□□□□ -1.65
NEB-218ENST00000603639 ACIN1Q9UKV3 1341 aaKnown RBP4.75□□□□□ -1.65
NEB-218ENST00000603639 DCAF1Q9Y4B6 1507 aa4.74□□□□□ -1.65
NEB-218ENST00000603639 TRIM44Q96DX7 344 aaPredicted RBP4.73□□□□□ -1.65
NEB-218ENST00000603639 ARID4BQ4LE39 1312 aaPredicted RBP4.73□□□□□ -1.65
NEB-218ENST00000603639 ZNF316A6NFI3 1004 aaPredicted RBP4.73□□□□□ -1.65
NEB-218ENST00000603639 MYO15BQ96JP2 1530 aa4.71□□□□□ -1.66
NEB-218ENST00000603639 TRIM41Q8WV44 630 aa4.67□□□□□ -1.66
NEB-218ENST00000603639 BAZ1BQ9UIG0 1483 aaKnown RBP4.65□□□□□ -1.67
NEB-218ENST00000603639 NEFMP07197 916 aa4.65□□□□□ -1.67
NEB-218ENST00000603639 USP35Q9P2H5 1018 aa4.65□□□□□ -1.67
NEB-218ENST00000603639 PPM1GO15355 546 aaPredicted RBP4.64□□□□□ -1.67
NEB-218ENST00000603639 SLC24A1O60721 1099 aa4.63□□□□□ -1.67
NEB-218ENST00000603639 ANP32CO43423 234 aa4.63□□□□□ -1.67
NEB-218ENST00000603639 ZNF326Q5BKZ1 582 aaKnown RBP4.62□□□□□ -1.67
NEB-218ENST00000603639 ANP32AP39687 249 aaKnown RBP4.61□□□□□ -1.67
NEB-218ENST00000603639 POLR3GLQ9BT43 218 aa4.61□□□□□ -1.67
NEB-218ENST00000603639 LOC105371045A0A1W2PR82 267 aa4.6□□□□□ -1.67
NEB-218ENST00000603639 UPF2Q9HAU5 1272 aaKnown RBP4.59□□□□□ -1.67
NEB-218ENST00000603639 UBTFP17480 764 aaKnown RBP4.59□□□□□ -1.68
NEB-218ENST00000603639 DDRGK1Q96HY6 314 aa4.58□□□□□ -1.68
NEB-218ENST00000603639 RSPH6AQ9H0K4 717 aa4.57□□□□□ -1.68
NEB-218ENST00000603639 TNNT3P45378 269 aaPredicted RBP4.57□□□□□ -1.68
NEB-218ENST00000603639 HSP90AA1P07900 732 aaKnown RBP4.57□□□□□ -1.68
NEB-218ENST00000603639 LAS1LQ9Y4W2 734 aaKnown RBP4.56□□□□□ -1.68
NEB-218ENST00000603639 TIMELESSQ9UNS1 1208 aa4.54□□□□□ -1.68
NEB-218ENST00000603639 BECN1Q14457 450 aa4.54□□□□□ -1.68
NEB-218ENST00000603639 NACADO15069 1562 aa4.53□□□□□ -1.68
NEB-218ENST00000603639 CALRP27797 417 aaKnown RBP4.53□□□□□ -1.68
NEB-218ENST00000603639 EEA1Q15075 1411 aa4.53□□□□□ -1.68
NEB-218ENST00000603639 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.53□□□□□ -1.68
NEB-218ENST00000603639 FKBP8Q14318 412 aa4.52□□□□□ -1.69
NEB-218ENST00000603639 CHMP4BQ9H444 224 aaKnown RBP4.52□□□□□ -1.69
NEB-218ENST00000603639 PPP4R2Q9NY27 417 aa4.51□□□□□ -1.69
NEB-218ENST00000603639 CFAP44Q96MT7 982 aa4.51□□□□□ -1.69
NEB-218ENST00000603639 ATP1B4Q9UN42 357 aaPredicted RBP4.5□□□□□ -1.69
NEB-218ENST00000603639 ZCCHC6Q5VYS8 1495 aaKnown RBP4.5□□□□□ -1.69
NEB-218ENST00000603639 GOLGA6L3A6NEY3 463 aa4.5□□□□□ -1.69
NEB-218ENST00000603639 SCAF1Q9H7N4 1312 aaKnown RBP4.5□□□□□ -1.69
NEB-218ENST00000603639 L1TD1Q5T7N2 865 aaKnown RBP4.49□□□□□ -1.69
NEB-218ENST00000603639 HSP90AA2PQ14568 343 aaPredicted RBP4.49□□□□□ -1.69
NEB-218ENST00000603639 MTERF4Q7Z6M4 381 aaKnown RBP4.49□□□□□ -1.69
NEB-218ENST00000603639 PNNQ9H307 717 aaKnown RBP4.49□□□□□ -1.69
NEB-218ENST00000603639 GOLGA6L22H0YM25 854 aa4.48□□□□□ -1.69
NEB-218ENST00000603639 SKOR2Q2VWA4 1001 aaPredicted RBP4.48□□□□□ -1.69
NEB-218ENST00000603639 TMC1Q8TDI8 760 aa4.48□□□□□ -1.69
NEB-218ENST00000603639 RBM19Q9Y4C8 960 aaKnown RBP4.48□□□□□ -1.69
NEB-218ENST00000603639 MAP7D2Q96T17 732 aa4.47□□□□□ -1.69
NEB-218ENST00000603639 BCANQ96GW7 911 aa4.47□□□□□ -1.69
NEB-218ENST00000603639 CDK11BP21127 795 aaKnown RBP4.47□□□□□ -1.69
NEB-218ENST00000603639 RB1CC1Q8TDY2 1594 aa4.47□□□□□ -1.69
NEB-218ENST00000603639 CNGB1Q14028 1251 aaPredicted RBP4.47□□□□□ -1.69
NEB-218ENST00000603639 CHMP4CQ96CF2 233 aa4.46□□□□□ -1.69
NEB-218ENST00000603639 CCDC136Q96JN2 1154 aa4.46□□□□□ -1.7
NEB-218ENST00000603639 MS4A1P11836 297 aa4.45□□□□□ -1.7
NEB-218ENST00000603639 TAF3Q5VWG9 929 aa4.45□□□□□ -1.7
NEB-218ENST00000603639 APPP05067 770 aa4.44□□□□□ -1.7
NEB-218ENST00000603639 MIER1Q8N108 512 aa4.44□□□□□ -1.7
NEB-218ENST00000603639 PKNOX2Q96KN3 472 aa4.43□□□□□ -1.7
NEB-218ENST00000603639 NRDCO43847 1150 aa4.43□□□□□ -1.7
NEB-218ENST00000603639 CHMP4AQ9BY43 222 aa4.43□□□□□ -1.7
NEB-218ENST00000603639 CSPP1Q1MSJ5 1256 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms