Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
NPHS1O60500 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHS1O60500 RNU4-11P-201ENST00000365287 132 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RNU6-136P-201ENST00000384663 107 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 MIR181A2-201ENST00000384863 110 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 MIR15B-201ENST00000385045 98 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RNU6-1228P-201ENST00000391014 107 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RN7SKP123-201ENST00000410732 291 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RPS29P6-201ENST00000438196 145 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 MTCO1P44-201ENST00000441935 243 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 CYCSP35-201ENST00000451978 304 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RPS27P22-201ENST00000478056 241 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 RPL23AP54-201ENST00000495129 419 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHS1O60500 RNU6-991P-201ENST00000516168 107 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.93□□□□□ -1.94
NPHS1O60500 UBL5P2-201ENST00000583788 219 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 DNAJC19P2-201ENST00000593340 302 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 AC008739.3-201ENST00000603262 127 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.93□□□□□ -1.94
NPHS1O60500 AC093732.2-201ENST00000607950 274 ntBASIC2.93□□□□□ -1.94
NPHS1O60500 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
NPHS1O60500 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.93□□□□□ -1.94
NPHS1O60500 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NPHS1O60500 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.92□□□□□ -1.94
NPHS1O60500 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPHS1O60500 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPHS1O60500 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPHS1O60500 RNU6-117P-201ENST00000365415 107 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 RNA5SP344-201ENST00000411081 104 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 CYP2C59P-201ENST00000457790 269 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 RNU2-34P-201ENST00000516534 121 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 RNU7-116P-201ENST00000516940 62 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 RNU6-56P-201ENST00000516986 93 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 AC015720.1-201ENST00000565251 277 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR548X2-201ENST00000579776 100 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR548AI-201ENST00000579940 88 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR4444-1-201ENST00000581696 74 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR4444-2-201ENST00000584390 74 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 MIR92B-201ENST00000607575 96 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.92□□□□□ -1.94
NPHS1O60500 AC006435.5-201ENST00000624486 112 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.92□□□□□ -1.94
NPHS1O60500 AC009487.4-201ENST00000624969 3585 ntBASIC2.92□□□□□ -1.94
NPHS1O60500 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NPHS1O60500 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHS1O60500 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHS1O60500 RNU6-1117P-201ENST00000384525 104 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 MIR183-201ENST00000384958 110 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 Y_RNA.586-201ENST00000391146 98 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 MIR1278-201ENST00000408753 81 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 RNU2-48P-201ENST00000410694 191 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 AC104332.2-201ENST00000429959 156 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.91□□□□□ -1.94
NPHS1O60500 AC025750.2-201ENST00000442609 450 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHS1O60500 RNU6-437P-201ENST00000459408 95 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.91□□□□□ -1.94
NPHS1O60500 AC093259.1-201ENST00000509755 300 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 SNORA48.11-201ENST00000517015 89 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.91□□□□□ -1.94
NPHS1O60500 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.91□□□□□ -1.94
NPHS1O60500 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.91□□□□□ -1.94
NPHS1O60500 U6.105-201ENST00000637379 88 ntBASIC2.91□□□□□ -1.94
NPHS1O60500 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NPHS1O60500 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
NPHS1O60500 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.94
NPHS1O60500 AC100821.1-201ENST00000523153 2479 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 MIR340-201ENST00000362125 95 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 MIR22-201ENST00000362190 85 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 Y_RNA.337-201ENST00000365312 102 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 RNU6-728P-201ENST00000365375 104 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.9□□□□□ -1.95
NPHS1O60500 RNU6-643P-201ENST00000384018 107 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 RNU6-959P-201ENST00000384671 107 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 MIR670-201ENST00000390142 98 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 RNU6-220P-201ENST00000390919 107 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 SNORD88.1-201ENST00000408684 91 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 SNORA11-201ENST00000408789 128 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 RNU6-257P-201ENST00000410238 98 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 AC123900.1-201ENST00000420390 96 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.9□□□□□ -1.95
NPHS1O60500 UBBP3-201ENST00000445497 241 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 RPL21P129-201ENST00000491732 478 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 SNORA25.12-201ENST00000516202 82 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHS1O60500 AL356280.1-201ENST00000603614 379 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 MIR7975-201ENST00000619350 68 ntBASIC2.9□□□□□ -1.95
NPHS1O60500 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHS1O60500 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.9□□□□□ -1.95
NPHS1O60500 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
NPHS1O60500 ZNF702P-202ENST00000434269 1966 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 RNU4-13P-201ENST00000364019 141 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 RNU6-1180P-201ENST00000364935 107 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 Y_RNA.332-201ENST00000365271 113 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 RNU6-1081P-201ENST00000384537 107 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms