Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 CLEC4GP1-201ENST00000596555 870 ntBASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC23.59■■□□□ 1.37
SH3TC1Q8TE82 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SH3TC1Q8TE82 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3TC1Q8TE82 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SH3TC1Q8TE82 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SH3TC1Q8TE82 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 SLC25A24-204ENST00000569674 2357 ntBASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 AL121894.2-201ENST00000602977 491 ntBASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.57■■□□□ 1.36
SH3TC1Q8TE82 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 NPAP1P7-201ENST00000613027 823 ntBASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 AC112497.1-201ENST00000624824 639 ntBASIC23.56■■□□□ 1.36
SH3TC1Q8TE82 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SH3TC1Q8TE82 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SH3TC1Q8TE82 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms