Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 RN7SKP284-201ENST00000411002 343 ntBASIC3.07□□□□□ -1.92
KLF4O43474 RNU2-61P-201ENST00000411069 191 ntBASIC3.07□□□□□ -1.92
KLF4O43474 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.07□□□□□ -1.92
KLF4O43474 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.07□□□□□ -1.92
KLF4O43474 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.07□□□□□ -1.92
KLF4O43474 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.07□□□□□ -1.92
KLF4O43474 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.07□□□□□ -1.92
KLF4O43474 SNORA74D-201ENST00000516404 141 ntBASIC3.07□□□□□ -1.92
KLF4O43474 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.07□□□□□ -1.92
KLF4O43474 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.07□□□□□ -1.92
KLF4O43474 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.07□□□□□ -1.92
KLF4O43474 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
KLF4O43474 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
KLF4O43474 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.07□□□□□ -1.92
KLF4O43474 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
KLF4O43474 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLF4O43474 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLF4O43474 RNU6-740P-201ENST00000364734 105 ntBASIC3.06□□□□□ -1.92
KLF4O43474 SNORA20B-201ENST00000384220 132 ntBASIC3.06□□□□□ -1.92
KLF4O43474 SNORD17-201ENST00000390930 237 ntBASIC3.06□□□□□ -1.92
KLF4O43474 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.06□□□□□ -1.92
KLF4O43474 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.06□□□□□ -1.92
KLF4O43474 BX510359.1-201ENST00000456973 237 ntBASIC3.06□□□□□ -1.92
KLF4O43474 AP001486.1-201ENST00000463339 476 ntBASIC3.06□□□□□ -1.92
KLF4O43474 RNU6-856P-201ENST00000516959 98 ntBASIC3.06□□□□□ -1.92
KLF4O43474 CYCSP26-201ENST00000534107 320 ntBASIC3.06□□□□□ -1.92
KLF4O43474 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
KLF4O43474 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.06□□□□□ -1.92
KLF4O43474 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.06□□□□□ -1.92
KLF4O43474 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
KLF4O43474 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.05□□□□□ -1.92
KLF4O43474 SNORD56.3-201ENST00000363507 71 ntBASIC3.05□□□□□ -1.92
KLF4O43474 RNU6-525P-201ENST00000363685 104 ntBASIC3.05□□□□□ -1.92
KLF4O43474 RNU6-1289P-201ENST00000384431 106 ntBASIC3.05□□□□□ -1.92
KLF4O43474 SNORD58.1-201ENST00000391313 66 ntBASIC3.05□□□□□ -1.92
KLF4O43474 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
KLF4O43474 AL121890.1-201ENST00000435457 205 ntBASIC3.05□□□□□ -1.92
KLF4O43474 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.05□□□□□ -1.92
KLF4O43474 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
KLF4O43474 SNORA64.4-201ENST00000516632 81 ntBASIC3.05□□□□□ -1.92
KLF4O43474 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.05□□□□□ -1.92
KLF4O43474 AC087441.2-201ENST00000529141 262 ntBASIC3.05□□□□□ -1.92
KLF4O43474 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
KLF4O43474 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
KLF4O43474 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
KLF4O43474 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.05□□□□□ -1.92
KLF4O43474 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
KLF4O43474 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.05□□□□□ -1.92
KLF4O43474 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.05□□□□□ -1.92
KLF4O43474 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLF4O43474 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLF4O43474 SNORA27.1-201ENST00000362604 124 ntBASIC3.04□□□□□ -1.92
KLF4O43474 RNA5SP383-201ENST00000362934 120 ntBASIC3.04□□□□□ -1.92
KLF4O43474 RNU6-407P-201ENST00000365280 104 ntBASIC3.04□□□□□ -1.92
KLF4O43474 Y_RNA.539-201ENST00000384635 107 ntBASIC3.04□□□□□ -1.92
KLF4O43474 SNORA40.19-201ENST00000390846 128 ntBASIC3.04□□□□□ -1.92
KLF4O43474 RNU6-855P-201ENST00000410395 104 ntBASIC3.04□□□□□ -1.92
KLF4O43474 RNA5SP492-201ENST00000411330 114 ntBASIC3.04□□□□□ -1.92
KLF4O43474 AC005326.1-201ENST00000429197 123 ntBASIC3.04□□□□□ -1.92
KLF4O43474 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
KLF4O43474 RN7SL807P-201ENST00000470923 297 ntBASIC3.04□□□□□ -1.92
KLF4O43474 IGKV2-26-201ENST00000518305 343 ntBASIC3.04□□□□□ -1.92
KLF4O43474 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLF4O43474 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KLF4O43474 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
KLF4O43474 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.82-201ENST00000363000 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.92-201ENST00000363043 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.235-201ENST00000364412 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.306-201ENST00000365015 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.312-201ENST00000365089 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.322-201ENST00000365151 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.341-201ENST00000365341 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.361-201ENST00000365515 120 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.456-201ENST00000384232 111 ntBASIC3.03□□□□□ -1.92
KLF4O43474 RNU6-662P-201ENST00000384253 104 ntBASIC3.03□□□□□ -1.92
KLF4O43474 MIR29C-201ENST00000385231 88 ntBASIC3.03□□□□□ -1.92
KLF4O43474 AL355796.1-201ENST00000406706 323 ntBASIC3.03□□□□□ -1.92
KLF4O43474 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
KLF4O43474 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
KLF4O43474 RPL23AP7-203ENST00000449021 469 ntBASIC3.03□□□□□ -1.92
KLF4O43474 HSPE1P13-201ENST00000451143 297 ntBASIC3.03□□□□□ -1.92
KLF4O43474 RNU1-131P-201ENST00000458943 161 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.650-201ENST00000459002 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.777-201ENST00000516982 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 AL137100.2-201ENST00000555786 315 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.771-201ENST00000598668 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 Y_RNA.789-201ENST00000622480 102 ntBASIC3.03□□□□□ -1.92
KLF4O43474 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
KLF4O43474 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
KLF4O43474 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
KLF4O43474 AC131280.1-202ENST00000624067 4211 ntBASIC3.02□□□□□ -1.93
KLF4O43474 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KLF4O43474 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.02□□□□□ -1.93
KLF4O43474 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms