Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 RNY1P6-201ENST00000384193 109 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 YME1L1P1-201ENST00000429435 297 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 RPS4XP11-201ENST00000446897 772 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-221P-201ENST00000459541 99 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 RNU5F-4P-201ENST00000516581 114 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC61Q9Y6R9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 FAM35CP-201ENST00000554755 2470 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 SNORD35B-201ENST00000363660 87 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-1210P-201ENST00000363775 107 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 RNA5SP399-201ENST00000364003 117 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-944P-201ENST00000364023 107 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-748P-201ENST00000384648 107 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 MIR300-201ENST00000401138 83 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC093578.1-201ENST00000415219 368 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 CRYBB2P1-203ENST00000415709 538 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC008155.2-201ENST00000464337 397 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC011604.1-201ENST00000545978 196 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC011602.1-201ENST00000546484 331 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 MIR3944-201ENST00000581277 108 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 MIR4753-201ENST00000585119 83 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC069200.1-201ENST00000609511 323 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 PCAT14-202ENST00000627127 3935 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 AC015813.6-201ENST00000624409 5808 ntBASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CCDC61Q9Y6R9 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 SNORA63.1-201ENST00000362493 131 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 Y_RNA.507-201ENST00000384500 99 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-750P-201ENST00000390946 107 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 SNORA12-201ENST00000391162 147 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 SNORA3.3-201ENST00000408712 125 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 MRPL35P3-201ENST00000421557 364 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-795P-201ENST00000516323 103 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 RNU1-95P-201ENST00000516357 160 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 RNU1-128P-201ENST00000516704 160 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 AC026403.1-201ENST00000518938 295 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 AC087499.8-201ENST00000578406 226 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 MIR5197-201ENST00000583721 112 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 Z82217.1-201ENST00000625157 8149 ntBASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC61Q9Y6R9 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-170P-201ENST00000362832 104 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 SNORD46.1-201ENST00000364139 104 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 MIR1283-1-201ENST00000408494 87 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 SNRPGP10-201ENST00000432323 225 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 RNU7-164P-201ENST00000459221 62 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 MRPS17P9-201ENST00000511924 393 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-693P-201ENST00000516134 107 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 MIR432-201ENST00000606207 94 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 AC012531.4-201ENST00000616509 177 ntBASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC61Q9Y6R9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-655P-201ENST00000362858 107 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 SNORA33-201ENST00000363664 130 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RNA5SP387-201ENST00000364226 106 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RNA5SP296-201ENST00000410523 111 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RNU6-267P-201ENST00000516714 103 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RN7SKP282-201ENST00000516824 299 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 RN7SKP289-201ENST00000517244 295 ntBASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC61Q9Y6R9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.53
CCDC61Q9Y6R9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.46□□□□□ -1.53
CCDC61Q9Y6R9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 RPS27P22-201ENST00000478056 241 ntBASIC5.46□□□□□ -1.54
CCDC61Q9Y6R9 RN7SL271P-201ENST00000487601 295 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 228.9 ms