Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 AP002826.1-201ENST00000608835 315 ntBASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL138880.2-201ENST00000616214 239 ntBASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR6134-201ENST00000617606 109 ntBASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC009541.1-201ENST00000438279 2662 ntBASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.07□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR26A1-201ENST00000362205 77 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR411-201ENST00000362239 96 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-884P-201ENST00000363889 107 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-740P-201ENST00000364734 105 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNA5SP267-201ENST00000364893 126 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU4-9P-201ENST00000364951 139 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU1-140P-201ENST00000365040 165 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU1-73P-201ENST00000383971 164 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.418-201ENST00000384029 102 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORD63-201ENST00000384262 68 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORD116-20-201ENST00000384529 92 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR134-201ENST00000385258 73 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORD78.2-201ENST00000391076 69 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MTCO2P33-201ENST00000402100 465 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL031121.1-201ENST00000406553 254 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR548M-201ENST00000408260 86 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL139281.1-201ENST00000422120 335 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL512844.2-201ENST00000433990 593 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RPL23AP58-201ENST00000440453 469 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC096638.1-201ENST00000444678 216 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC016700.2-201ENST00000446011 156 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RPL23AP49-201ENST00000492925 468 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RN7SL504P-201ENST00000494496 287 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU4-71P-201ENST00000516258 113 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-182P-201ENST00000516970 105 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-56P-201ENST00000516986 93 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC034105.4-201ENST00000568304 277 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ZNF861P-201ENST00000588126 639 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC010620.2-201ENST00000600135 313 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL078605.1-201ENST00000603529 500 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SCARNA4-202ENST00000625402 129 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR3651-201ENST00000630427 90 ntBASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
IGKV3D-20A0A0C4DH25 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORD56.1-201ENST00000362913 68 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORD115-32-201ENST00000364079 82 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-290P-201ENST00000365212 101 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNY4P28-201ENST00000365281 93 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-281P-201ENST00000384212 103 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.504-201ENST00000384481 104 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.506-201ENST00000384494 102 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 SNORA1.3-201ENST00000384676 136 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR329-1-201ENST00000385028 80 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR887-201ENST00000401258 79 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR1289-1-201ENST00000408836 144 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-1140P-201ENST00000410517 106 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 COX6CP10-201ENST00000416832 224 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RPS15AP7-201ENST00000439294 405 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AL353705.4-201ENST00000449661 238 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MTATP6P7-201ENST00000453315 681 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 snoU13.6-201ENST00000458785 104 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.644-201ENST00000459006 113 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNA5SP310-201ENST00000459084 116 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RN7SL601P-201ENST00000471221 293 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC091826.1-201ENST00000514065 313 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.674-201ENST00000516362 113 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-567P-201ENST00000516746 107 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 Y_RNA.700-201ENST00000516806 100 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-928P-201ENST00000516876 104 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 RNU6-1212P-201ENST00000517023 104 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AP002001.1-203ENST00000534002 267 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 LINC00933-203ENST00000559812 219 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 MIR3910-1-201ENST00000580936 111 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 BX284668.6-201ENST00000606899 438 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 U6.104-201ENST00000637979 90 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 AC068700.1-201ENST00000565862 3754 ntBASIC2.05□□□□□ -2.08
IGKV3D-20A0A0C4DH25 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
IGKV3D-20A0A0C4DH25 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 290.3 ms