RNA–Protein interactions for RNA: ENST00000494496.3

RN7SL504P-201, Transcript of RNA, 7SL, cytoplasmic 504, pseudogene, humanhuman

BASIC

Gene RN7SL504P, Length 287 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL504P-201ENST00000494496 AEBP2Q6ZN18 517 aaPredicted RBP9.4□□□□□ -0.9
RN7SL504P-201ENST00000494496 CHIC1Q5VXU3 224 aa9.01□□□□□ -0.97
RN7SL504P-201ENST00000494496 NISCHQ9Y2I1 1504 aa8.24□□□□□ -1.09
RN7SL504P-201ENST00000494496 SENP3Q9H4L4 574 aaPredicted RBP7.96□□□□□ -1.14
RN7SL504P-201ENST00000494496 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
RN7SL504P-201ENST00000494496 ABCC9O60706 1549 aa7.58□□□□□ -1.2
RN7SL504P-201ENST00000494496 FOXD1Q16676 465 aa7.44□□□□□ -1.22
RN7SL504P-201ENST00000494496 CCDC180Q9P1Z9 1646 aa7.3□□□□□ -1.24
RN7SL504P-201ENST00000494496 DNAJC5BQ9UF47 199 aa7.29□□□□□ -1.24
RN7SL504P-201ENST00000494496 PLPPR3Q6T4P5 718 aa7.23□□□□□ -1.25
RN7SL504P-201ENST00000494496 PABPN1Q86U42 306 aaKnown RBP eCLIP7.11□□□□□ -1.27
RN7SL504P-201ENST00000494496 DCAF8L2P0C7V8 631 aa7.09□□□□□ -1.27
RN7SL504P-201ENST00000494496 PPP6R1Q9UPN7 881 aa7.07□□□□□ -1.28
RN7SL504P-201ENST00000494496 RB1CC1Q8TDY2 1594 aa7.05□□□□□ -1.28
RN7SL504P-201ENST00000494496 ADRA2BP18089 450 aa7.04□□□□□ -1.28
RN7SL504P-201ENST00000494496 NACADO15069 1562 aa6.99□□□□□ -1.29
RN7SL504P-201ENST00000494496 PIAS4Q8N2W9 510 aaPredicted RBP6.95□□□□□ -1.3
RN7SL504P-201ENST00000494496 BICRAQ9NZM4 1560 aa6.91□□□□□ -1.3
RN7SL504P-201ENST00000494496 MSH5O43196 834 aa6.86□□□□□ -1.31
RN7SL504P-201ENST00000494496 MYO15BQ96JP2 1530 aa6.85□□□□□ -1.31
RN7SL504P-201ENST00000494496 UNC13AQ9UPW8 1703 aa6.84□□□□□ -1.31
RN7SL504P-201ENST00000494496 CECR2Q9BXF3 1484 aa6.81□□□□□ -1.32
RN7SL504P-201ENST00000494496 ZCCHC6Q5VYS8 1495 aaKnown RBP6.8□□□□□ -1.32
RN7SL504P-201ENST00000494496 SCRIBQ14160 1630 aa6.77□□□□□ -1.33
RN7SL504P-201ENST00000494496 CC2D2AQ9P2K1 1620 aa6.77□□□□□ -1.33
RN7SL504P-201ENST00000494496 EIF4G1Q04637 1599 aaKnown RBP6.74□□□□□ -1.33
RN7SL504P-201ENST00000494496 DCAF1Q9Y4B6 1507 aa6.73□□□□□ -1.33
RN7SL504P-201ENST00000494496 SHROOM4Q9ULL8 1493 aa6.72□□□□□ -1.33
RN7SL504P-201ENST00000494496 DNAJC5Q9H3Z4 198 aa6.67□□□□□ -1.34
RN7SL504P-201ENST00000494496 POTEDQ86YR6 584 aa6.54□□□□□ -1.36
RN7SL504P-201ENST00000494496 NCAPD3P42695 1498 aa6.51□□□□□ -1.37
RN7SL504P-201ENST00000494496 ERCC6Q03468 1493 aa6.51□□□□□ -1.37
RN7SL504P-201ENST00000494496 ATAD2BQ9ULI0 1458 aa6.5□□□□□ -1.37
RN7SL504P-201ENST00000494496 NESP48681 1621 aa6.5□□□□□ -1.37
RN7SL504P-201ENST00000494496 CUX2O14529 1486 aa6.48□□□□□ -1.37
RN7SL504P-201ENST00000494496 MAPK8IP2Q13387 824 aaPredicted RBP6.44□□□□□ -1.38
RN7SL504P-201ENST00000494496 SMARCA4P51532 1647 aa6.41□□□□□ -1.38
RN7SL504P-201ENST00000494496 BAZ1BQ9UIG0 1483 aaKnown RBP6.41□□□□□ -1.38
RN7SL504P-201ENST00000494496 SMARCA2P51531 1590 aa6.4□□□□□ -1.38
RN7SL504P-201ENST00000494496 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
RN7SL504P-201ENST00000494496 MROH2BQ7Z745 1585 aa6.39□□□□□ -1.39
RN7SL504P-201ENST00000494496 PPP4R3CPQ6ZMV5 832 aa6.38□□□□□ -1.39
RN7SL504P-201ENST00000494496 TRIM41Q8WV44 630 aa6.38□□□□□ -1.39
RN7SL504P-201ENST00000494496 SCAF1Q9H7N4 1312 aaKnown RBP6.38□□□□□ -1.39
RN7SL504P-201ENST00000494496 THOC2Q8NI27 1593 aaKnown RBP6.35□□□□□ -1.39
RN7SL504P-201ENST00000494496 BAZ1AQ9NRL2 1556 aaPredicted RBP6.35□□□□□ -1.39
RN7SL504P-201ENST00000494496 DMRT2Q9Y5R5 561 aa6.34□□□□□ -1.39
RN7SL504P-201ENST00000494496 PEG3Q9GZU2 1588 aa6.33□□□□□ -1.4
RN7SL504P-201ENST00000494496 PDS5BQ9NTI5 1447 aa6.33□□□□□ -1.4
RN7SL504P-201ENST00000494496 CADPSQ9ULU8 1353 aa6.32□□□□□ -1.4
RN7SL504P-201ENST00000494496 LAMC3Q9Y6N6 1575 aa6.31□□□□□ -1.4
RN7SL504P-201ENST00000494496 MRC2Q9UBG0 1479 aa6.28□□□□□ -1.4
RN7SL504P-201ENST00000494496 KIF21AQ7Z4S6 1674 aa6.28□□□□□ -1.4
RN7SL504P-201ENST00000494496 WIZO95785 1651 aa6.26□□□□□ -1.41
RN7SL504P-201ENST00000494496 WDR62O43379 1518 aa6.25□□□□□ -1.41
RN7SL504P-201ENST00000494496 FANCD2Q9BXW9 1451 aa6.25□□□□□ -1.41
RN7SL504P-201ENST00000494496 RSF1Q96T23 1441 aaPredicted RBP6.24□□□□□ -1.41
RN7SL504P-201ENST00000494496 CEP164Q9UPV0 1460 aa6.23□□□□□ -1.41
RN7SL504P-201ENST00000494496 OSCARQ8IYS5 282 aa6.23□□□□□ -1.41
RN7SL504P-201ENST00000494496 CFTRP13569 1480 aa6.22□□□□□ -1.41
RN7SL504P-201ENST00000494496 URB2Q14146 1524 aaKnown RBP6.22□□□□□ -1.41
RN7SL504P-201ENST00000494496 CNKSR2Q8WXI2 1034 aa6.21□□□□□ -1.42
RN7SL504P-201ENST00000494496 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
RN7SL504P-201ENST00000494496 TOP2AP11388 1531 aaKnown RBP6.16□□□□□ -1.42
RN7SL504P-201ENST00000494496 HOXD11P31277 338 aaPredicted RBP6.16□□□□□ -1.42
RN7SL504P-201ENST00000494496 CCDC88BA6NC98 1476 aa6.15□□□□□ -1.43
RN7SL504P-201ENST00000494496 CYB5RLQ6IPT4 315 aa6.14□□□□□ -1.43
RN7SL504P-201ENST00000494496 NCBP3Q53F19 620 aaKnown RBP6.13□□□□□ -1.43
RN7SL504P-201ENST00000494496 RNF216Q9NWF9 866 aaPredicted RBP6.13□□□□□ -1.43
RN7SL504P-201ENST00000494496 AQRO60306 1485 aaKnown RBP eCLIP6.12□□□□□ -1.43
RN7SL504P-201ENST00000494496 TOPBP1Q92547 1522 aa6.12□□□□□ -1.43
RN7SL504P-201ENST00000494496 IFT140Q96RY7 1462 aa6.12□□□□□ -1.43
RN7SL504P-201ENST00000494496 RIMBP3CA6NJZ7 1639 aa6.11□□□□□ -1.43
RN7SL504P-201ENST00000494496 RIMBP3BA6NNM3 1639 aa6.11□□□□□ -1.43
RN7SL504P-201ENST00000494496 RIMBP3Q9UFD9 1639 aa6.11□□□□□ -1.43
RN7SL504P-201ENST00000494496 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
RN7SL504P-201ENST00000494496 FBLN2P98095 1184 aa6.11□□□□□ -1.43
RN7SL504P-201ENST00000494496 TDRD9Q8NDG6 1382 aaKnown RBP6.09□□□□□ -1.43
RN7SL504P-201ENST00000494496 NPM3O75607 178 aaKnown RBP6.08□□□□□ -1.44
RN7SL504P-201ENST00000494496 TRHP20396 242 aaPredicted RBP6.08□□□□□ -1.44
RN7SL504P-201ENST00000494496 KCNA4P22459 653 aa6.08□□□□□ -1.44
RN7SL504P-201ENST00000494496 ARAP1Q96P48 1450 aa6.08□□□□□ -1.44
RN7SL504P-201ENST00000494496 RAD54L2Q9Y4B4 1467 aa6.08□□□□□ -1.44
RN7SL504P-201ENST00000494496 DCAF8L1A6NGE4 600 aa6.06□□□□□ -1.44
RN7SL504P-201ENST00000494496 POLA1P09884 1462 aaPredicted RBP6.06□□□□□ -1.44
RN7SL504P-201ENST00000494496 EIF4G3O43432 1585 aaKnown RBP6.06□□□□□ -1.44
RN7SL504P-201ENST00000494496 SOGA1O94964 1423 aa6.04□□□□□ -1.44
RN7SL504P-201ENST00000494496 DNMBPQ6XZF7 1577 aa6.04□□□□□ -1.44
RN7SL504P-201ENST00000494496 TARBP1Q13395 1621 aaKnown RBP6.03□□□□□ -1.44
RN7SL504P-201ENST00000494496 SNAPC4Q5SXM2 1469 aa6.02□□□□□ -1.44
RN7SL504P-201ENST00000494496 ABCC8Q09428 1581 aa6.01□□□□□ -1.45
RN7SL504P-201ENST00000494496 CHMP7Q8WUX9 453 aaPredicted RBP6.01□□□□□ -1.45
RN7SL504P-201ENST00000494496 FGD5Q6ZNL6 1462 aa6.01□□□□□ -1.45
RN7SL504P-201ENST00000494496 CUX1P39880 1505 aa5.99□□□□□ -1.45
RN7SL504P-201ENST00000494496 CHD1O14646 1710 aa5.99□□□□□ -1.45
RN7SL504P-201ENST00000494496 CLASP1Q7Z460 1538 aa5.97□□□□□ -1.45
RN7SL504P-201ENST00000494496 PRDM2Q13029 1718 aa5.96□□□□□ -1.45
RN7SL504P-201ENST00000494496 GRIN2BQ13224 1484 aa5.96□□□□□ -1.45
RN7SL504P-201ENST00000494496 MAGI1Q96QZ7 1491 aaPredicted RBP5.96□□□□□ -1.46
RN7SL504P-201ENST00000494496 SUPT5HO00267 1087 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms