Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 AL121906.2-201ENST00000621597 723 ntBASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM56-RWDD3S4R434 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 AC008764.6-201ENST00000595909 2069 ntBASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM56-RWDD3S4R434 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 TSPY21P-201ENST00000433481 731 ntBASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 KRT18P5-201ENST00000436075 1291 ntBASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 MIR6821-201ENST00000617625 74 ntBASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TMEM56-RWDD3S4R434 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TMEM56-RWDD3S4R434 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TUBB8P6-201ENST00000436895 1288 ntBASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.49■□□□□ 0.07
TMEM56-RWDD3S4R434 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms