Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RNA5SP267-201ENST00000364893 126 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 PTMAP2-201ENST00000397627 327 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 MIR513C-201ENST00000401352 84 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 RNU6ATAC-201ENST00000408749 126 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 RN7SKP156-201ENST00000410308 342 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.11□□□□□ -1.75
GRIK1P39086 AC083863.1-201ENST00000438811 231 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.11□□□□□ -1.75
GRIK1P39086 AC022616.8-201ENST00000533569 253 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 AC006254.2-201ENST00000603259 279 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
GRIK1P39086 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
GRIK1P39086 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
GRIK1P39086 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
GRIK1P39086 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.11□□□□□ -1.75
GRIK1P39086 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
GRIK1P39086 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
GRIK1P39086 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
GRIK1P39086 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
GRIK1P39086 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
GRIK1P39086 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
GRIK1P39086 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.1□□□□□ -1.75
GRIK1P39086 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.1□□□□□ -1.75
GRIK1P39086 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 FTLP6-201ENST00000355274 422 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 RNU6-78P-201ENST00000362897 107 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 Y_RNA.101-201ENST00000363154 102 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 Y_RNA.121-201ENST00000363309 113 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 SNORD115-32-201ENST00000364079 82 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 Y_RNA.230-201ENST00000364348 109 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 RNU5E-7P-201ENST00000365290 117 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 RNU6-1145P-201ENST00000384246 107 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 RNU6-166P-201ENST00000384371 107 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 MIR153-2-201ENST00000385225 87 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 RNU6-1064P-201ENST00000410626 104 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 SNORA57.3-201ENST00000411095 141 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.1□□□□□ -1.75
GRIK1P39086 FABP5P15-201ENST00000453566 214 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.1□□□□□ -1.75
GRIK1P39086 Y_RNA.797-201ENST00000515977 94 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 MIR2114-201ENST00000516645 80 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.1□□□□□ -1.75
GRIK1P39086 CYCSP26-201ENST00000534107 320 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC022441.3-201ENST00000605737 136 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC068831.7-201ENST00000616954 363 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC039056.2-201ENST00000622261 511 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 AC241585.2-209ENST00000638217 143 ntBASIC4.1□□□□□ -1.75
GRIK1P39086 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
GRIK1P39086 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
GRIK1P39086 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GRIK1P39086 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
GRIK1P39086 SRP72P2-201ENST00000344851 1979 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
GRIK1P39086 RNY1P11-201ENST00000363759 113 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNU6-270P-201ENST00000364131 105 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 Y_RNA.245-201ENST00000364493 95 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 MIR539-201ENST00000365690 78 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNU6-1286P-201ENST00000383871 107 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNU6-147P-201ENST00000383983 107 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 U8.10-201ENST00000384260 133 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNU6-1197P-201ENST00000391183 107 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNA5SP89-201ENST00000410300 108 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 AL390729.2-201ENST00000416137 156 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.09□□□□□ -1.75
GRIK1P39086 RNU7-197P-201ENST00000458836 62 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RPL21P13-201ENST00000488305 481 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 Y_RNA.709-201ENST00000516952 92 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 SNORA31.19-201ENST00000517079 126 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNA5SP165-201ENST00000517142 115 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 RNU6-844P-201ENST00000517175 102 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 AC022695.1-201ENST00000522089 237 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIK1P39086 TRAV28-201ENST00000557548 323 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 MIR4444-1-201ENST00000581696 74 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 MIR4444-2-201ENST00000584390 74 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 DEFB117-201ENST00000602356 141 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.09□□□□□ -1.75
GRIK1P39086 CR392039.5-201ENST00000623201 510 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
GRIK1P39086 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
GRIK1P39086 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
GRIK1P39086 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.76
GRIK1P39086 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
GRIK1P39086 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
GRIK1P39086 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
GRIK1P39086 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GRIK1P39086 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
GRIK1P39086 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GRIK1P39086 Y_RNA.563-201ENST00000384707 108 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 RNU6-541P-201ENST00000384709 110 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 MIR493-201ENST00000385254 89 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 SNORA40C-201ENST00000391285 128 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
GRIK1P39086 RAB9AP3-201ENST00000412737 573 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 AC138623.1-201ENST00000418060 216 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 AC007560.1-201ENST00000426912 237 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 GOT2P5-201ENST00000433995 546 ntBASIC4.08□□□□□ -1.76
GRIK1P39086 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 251.4 ms