RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 DCAF8L2P0C7V8 631 aa6.75□□□□□ -1.33
KNTC1-201ENST00000333479 FAM9AQ8IZU1 332 aaPredicted RBP6.71□□□□□ -1.33
KNTC1-201ENST00000333479 NISCHQ9Y2I1 1504 aa6.69□□□□□ -1.34
KNTC1-201ENST00000333479 APLP2Q06481 763 aa6.13□□□□□ -1.43
KNTC1-201ENST00000333479 AEBP2Q6ZN18 517 aaPredicted RBP6□□□□□ -1.45
KNTC1-201ENST00000333479 MYT1LQ9UL68 1186 aa5.98□□□□□ -1.45
KNTC1-201ENST00000333479 ABCC9O60706 1549 aa5.93□□□□□ -1.46
KNTC1-201ENST00000333479 NPM1P06748 294 aaKnown RBP eCLIP5.84□□□□□ -1.47
KNTC1-201ENST00000333479 SUPT5HO00267 1087 aaKnown RBP5.84□□□□□ -1.48
KNTC1-201ENST00000333479 CCDC180Q9P1Z9 1646 aa5.83□□□□□ -1.48
KNTC1-201ENST00000333479 ESF1Q9H501 851 aaKnown RBP5.83□□□□□ -1.48
KNTC1-201ENST00000333479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.83□□□□□ -1.48
KNTC1-201ENST00000333479 HNRNPUL2Q1KMD3 747 aaKnown RBP5.83□□□□□ -1.48
KNTC1-201ENST00000333479 ATP1B4Q9UN42 357 aaPredicted RBP5.81□□□□□ -1.48
KNTC1-201ENST00000333479 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
KNTC1-201ENST00000333479 TRHP20396 242 aaPredicted RBP5.77□□□□□ -1.49
KNTC1-201ENST00000333479 PABPN1Q86U42 306 aaKnown RBP eCLIP5.77□□□□□ -1.498e-7■■■■□ 21.2
KNTC1-201ENST00000333479 PELP1Q8IZL8 1130 aaKnown RBP5.76□□□□□ -1.49
KNTC1-201ENST00000333479 SHROOM4Q9ULL8 1493 aa5.73□□□□□ -1.49
KNTC1-201ENST00000333479 FOXD1Q16676 465 aa5.69□□□□□ -1.5
KNTC1-201ENST00000333479 FBLN2P98095 1184 aa5.68□□□□□ -1.5
KNTC1-201ENST00000333479 TTBK1Q5TCY1 1321 aaPredicted RBP5.65□□□□□ -1.51
KNTC1-201ENST00000333479 UBTFP17480 764 aaKnown RBP5.64□□□□□ -1.51
KNTC1-201ENST00000333479 BCANQ96GW7 911 aa5.64□□□□□ -1.51
KNTC1-201ENST00000333479 CDK11AQ9UQ88 783 aaPredicted RBP5.62□□□□□ -1.51
KNTC1-201ENST00000333479 ERCC6Q03468 1493 aa5.61□□□□□ -1.51
KNTC1-201ENST00000333479 ZCCHC6Q5VYS8 1495 aaKnown RBP5.59□□□□□ -1.51
KNTC1-201ENST00000333479 NEFMP07197 916 aa5.59□□□□□ -1.51
KNTC1-201ENST00000333479 DCAF8L1A6NGE4 600 aa5.59□□□□□ -1.51
KNTC1-201ENST00000333479 RANGAP1P46060 587 aaPredicted RBP5.59□□□□□ -1.52
KNTC1-201ENST00000333479 STAG3Q9UJ98 1225 aa5.57□□□□□ -1.52
KNTC1-201ENST00000333479 CHIC1Q5VXU3 224 aa5.57□□□□□ -1.52
KNTC1-201ENST00000333479 CHMP7Q8WUX9 453 aaPredicted RBP5.56□□□□□ -1.52
KNTC1-201ENST00000333479 RB1CC1Q8TDY2 1594 aa5.55□□□□□ -1.52
KNTC1-201ENST00000333479 PLPPR3Q6T4P5 718 aa5.55□□□□□ -1.52
KNTC1-201ENST00000333479 EHMT2Q96KQ7 1210 aa5.53□□□□□ -1.52
KNTC1-201ENST00000333479 NACADO15069 1562 aa5.53□□□□□ -1.52
KNTC1-201ENST00000333479 CCER1Q8TC90 406 aaPredicted RBP5.53□□□□□ -1.52
KNTC1-201ENST00000333479 SLC4A1APQ9BWU0 796 aaKnown RBP5.52□□□□□ -1.53
KNTC1-201ENST00000333479 DCAF1Q9Y4B6 1507 aa5.5□□□□□ -1.53
KNTC1-201ENST00000333479 NPM2Q86SE8 214 aaKnown RBP5.5□□□□□ -1.53
KNTC1-201ENST00000333479 ARID4BQ4LE39 1312 aaPredicted RBP5.48□□□□□ -1.53
KNTC1-201ENST00000333479 HAP1P54257 671 aaPredicted RBP5.47□□□□□ -1.53
KNTC1-201ENST00000333479 SCRIBQ14160 1630 aa5.46□□□□□ -1.53
KNTC1-201ENST00000333479 HDGFP51858 240 aaKnown RBP5.46□□□□□ -1.54
KNTC1-201ENST00000333479 C14orf37Q86TY3 774 aa5.45□□□□□ -1.54
KNTC1-201ENST00000333479 SCAF1Q9H7N4 1312 aaKnown RBP5.45□□□□□ -1.54
KNTC1-201ENST00000333479 ACIN1Q9UKV3 1341 aaKnown RBP5.44□□□□□ -1.54
KNTC1-201ENST00000333479 ZBTB47Q9UFB7 747 aaPredicted RBP5.43□□□□□ -1.54
KNTC1-201ENST00000333479 MYO15BQ96JP2 1530 aa5.42□□□□□ -1.54
KNTC1-201ENST00000333479 PPP1R15AO75807 674 aaPredicted RBP5.42□□□□□ -1.54
KNTC1-201ENST00000333479 PHF23Q9BUL5 403 aaPredicted RBP5.38□□□□□ -1.55
KNTC1-201ENST00000333479 TRIM52Q96A61 297 aa5.38□□□□□ -1.55
KNTC1-201ENST00000333479 SLC24A1O60721 1099 aa5.37□□□□□ -1.55
KNTC1-201ENST00000333479 HMGB2P26583 209 aaKnown RBP5.37□□□□□ -1.55
KNTC1-201ENST00000333479 EIF4G2P78344 907 aaKnown RBP eCLIP5.36□□□□□ -1.55
KNTC1-201ENST00000333479 OSCARQ8IYS5 282 aa5.36□□□□□ -1.55
KNTC1-201ENST00000333479 NEFLP07196 543 aa5.35□□□□□ -1.55
KNTC1-201ENST00000333479 ZEB1P37275 1124 aaPredicted RBP5.35□□□□□ -1.55
KNTC1-201ENST00000333479 A0A0G2JS52 829 aa5.34□□□□□ -1.55
KNTC1-201ENST00000333479 MYT1Q01538 1121 aa5.34□□□□□ -1.55
KNTC1-201ENST00000333479 POLR3GLQ9BT43 218 aa5.34□□□□□ -1.55
KNTC1-201ENST00000333479 CHGAP10645 457 aaKnown RBP5.34□□□□□ -1.55
KNTC1-201ENST00000333479 CECR2Q9BXF3 1484 aa5.33□□□□□ -1.56
KNTC1-201ENST00000333479 TSPY4P0CV99 314 aa5.33□□□□□ -1.56
KNTC1-201ENST00000333479 TSPY10P0CW01 314 aa5.33□□□□□ -1.56
KNTC1-201ENST00000333479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.33□□□□□ -1.561e-6■■■□□ 17.9
KNTC1-201ENST00000333479 TMX4Q9H1E5 349 aaPredicted RBP5.33□□□□□ -1.56
KNTC1-201ENST00000333479 ZNF777Q9ULD5 760 aaPredicted RBP5.33□□□□□ -1.56
KNTC1-201ENST00000333479 PLEKHD1A6NEE1 506 aa5.32□□□□□ -1.56
KNTC1-201ENST00000333479 ANO8Q9HCE9 1232 aaPredicted RBP5.31□□□□□ -1.56
KNTC1-201ENST00000333479 PDS5BQ9NTI5 1447 aa5.31□□□□□ -1.56
KNTC1-201ENST00000333479 DAXXQ9UER7 740 aaPredicted RBP5.31□□□□□ -1.56
KNTC1-201ENST00000333479 FAM50AQ14320 339 aaKnown RBP5.3□□□□□ -1.56
KNTC1-201ENST00000333479 CYB5RLQ6IPT4 315 aa5.29□□□□□ -1.56
KNTC1-201ENST00000333479 NPHP1O15259 732 aa5.29□□□□□ -1.56
KNTC1-201ENST00000333479 CSRNP3Q8WYN3 585 aa5.29□□□□□ -1.56
KNTC1-201ENST00000333479 ERICH6Q7L0X2 663 aa5.28□□□□□ -1.56
KNTC1-201ENST00000333479 ITGAEP38570 1179 aa5.28□□□□□ -1.56
KNTC1-201ENST00000333479 MEX3CQ5U5Q3 659 aaKnown RBP5.27□□□□□ -1.57
KNTC1-201ENST00000333479 BAZ1AQ9NRL2 1556 aaPredicted RBP5.27□□□□□ -1.57
KNTC1-201ENST00000333479 SENP3Q9H4L4 574 aaPredicted RBP5.27□□□□□ -1.57
KNTC1-201ENST00000333479 SF3B2Q13435 895 aaKnown RBP5.26□□□□□ -1.57
KNTC1-201ENST00000333479 ZNF326Q5BKZ1 582 aaKnown RBP5.26□□□□□ -1.57
KNTC1-201ENST00000333479 WASHC2AQ641Q2 1341 aa5.25□□□□□ -1.57
KNTC1-201ENST00000333479 KANK1Q14678 1352 aa5.25□□□□□ -1.57
KNTC1-201ENST00000333479 CARMIL2Q6F5E8 1435 aa5.24□□□□□ -1.57
KNTC1-201ENST00000333479 EID1Q9Y6B2 187 aa5.24□□□□□ -1.57
KNTC1-201ENST00000333479 KCNH8Q96L42 1107 aa5.23□□□□□ -1.57
KNTC1-201ENST00000333479 BAZ1BQ9UIG0 1483 aaKnown RBP5.23□□□□□ -1.57
KNTC1-201ENST00000333479 SMARCA2P51531 1590 aa5.22□□□□□ -1.57
KNTC1-201ENST00000333479 GOLGA2Q08379 1002 aa5.22□□□□□ -1.57
KNTC1-201ENST00000333479 RSF1Q96T23 1441 aaPredicted RBP5.21□□□□□ -1.58
KNTC1-201ENST00000333479 CDK11BP21127 795 aaKnown RBP5.21□□□□□ -1.58
KNTC1-201ENST00000333479 DNAJC5Q9H3Z4 198 aa5.2□□□□□ -1.58
KNTC1-201ENST00000333479 CCDC9Q9Y3X0 531 aaKnown RBP5.2□□□□□ -1.58
KNTC1-201ENST00000333479 ZBTB7CA1YPR0 619 aa5.2□□□□□ -1.58
KNTC1-201ENST00000333479 CHMP4AQ9BY43 222 aa5.2□□□□□ -1.58
KNTC1-201ENST00000333479 CENPBP07199 599 aaPredicted RBP5.2□□□□□ -1.58
KNTC1-201ENST00000333479 DMRT2Q9Y5R5 561 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms