Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TK1P04183 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TK1P04183 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TK1P04183 AL138781.2-201ENST00000617896 1843 ntBASIC16.22■□□□□ 0.19
TK1P04183 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.21■□□□□ 0.19
TK1P04183 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TK1P04183 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.21■□□□□ 0.19
TK1P04183 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TK1P04183 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.21■□□□□ 0.19
TK1P04183 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.21■□□□□ 0.18
TK1P04183 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
TK1P04183 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TK1P04183 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.21■□□□□ 0.18
TK1P04183 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TK1P04183 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.21■□□□□ 0.18
TK1P04183 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TK1P04183 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.2■□□□□ 0.18
TK1P04183 KRT18P29-201ENST00000397031 1267 ntBASIC16.2■□□□□ 0.18
TK1P04183 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 AC133681.1-201ENST00000465482 601 ntBASIC16.2■□□□□ 0.18
TK1P04183 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 AC124016.1-201ENST00000609552 612 ntBASIC16.2■□□□□ 0.18
TK1P04183 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 ITM2C-210ENST00000620962 501 ntBASIC16.2■□□□□ 0.18
TK1P04183 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
TK1P04183 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TK1P04183 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TK1P04183 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TK1P04183 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.19■□□□□ 0.18
TK1P04183 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TK1P04183 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TK1P04183 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.19■□□□□ 0.18
TK1P04183 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.19■□□□□ 0.18
TK1P04183 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 C1QBPP2-201ENST00000528754 825 ntBASIC16.19■□□□□ 0.18
TK1P04183 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.19■□□□□ 0.18
TK1P04183 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TK1P04183 AC110285.5-201ENST00000611501 352 ntBASIC16.19■□□□□ 0.18
TK1P04183 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TK1P04183 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms