Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 SCARNA4.1-201ENST00000628597 123 ntBASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.06□□□□□ -1.6
TMEM88BA6NKF7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AL133412.1-201ENST00000380194 2992 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNU6-217P-201ENST00000384164 104 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNU6-72P-201ENST00000384285 79 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.574-201ENST00000384766 95 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNU6-823P-201ENST00000391042 103 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 U3.37-201ENST00000408528 213 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNU1-95P-201ENST00000516357 160 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNU1-128P-201ENST00000516704 160 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RNA5SP73-201ENST00000516744 108 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AP004607.1-201ENST00000524456 203 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 MIR4513-201ENST00000581077 86 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 VN1R107P-201ENST00000601784 209 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 AL021997.2-201ENST00000615674 271 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 U4.7-201ENST00000638126 106 ntBASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TMEM88BA6NKF7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 FTLP6-201ENST00000355274 422 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 RNU6-227P-201ENST00000362865 103 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.193-201ENST00000363979 102 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 SNORA63.7-201ENST00000365579 123 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 Y_RNA.533-201ENST00000384596 114 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 MIR628-201ENST00000385229 95 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 MTCO3P19-201ENST00000415864 321 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 AL731563.1-201ENST00000442202 214 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 AC093852.1-201ENST00000503587 266 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 HMGB1P14-201ENST00000557424 591 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 VN1R91P-201ENST00000594377 169 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 MIR4272-201ENST00000635924 64 ntBASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TMEM88BA6NKF7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 RHOT1P2-201ENST00000366423 333 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 RNU6-658P-201ENST00000384606 106 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 MIR183-201ENST00000384958 110 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 MIR568-201ENST00000385036 95 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 SAR1AP2-201ENST00000392696 594 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 MTCYBP2-201ENST00000407745 171 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 HMGB1P12-201ENST00000438594 598 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 HMGB3P8-201ENST00000449709 577 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 AL451050.1-201ENST00000450126 415 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 ABCF2P2-201ENST00000450549 296 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 RNU6-703P-201ENST00000516946 107 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 AC008962.1-201ENST00000605729 304 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 SNORD58B-201ENST00000607313 66 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 RNA5SP439-201ENST00000617595 124 ntBASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TMEM88BA6NKF7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms